RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 TSGA10IPQ3SY00 556 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 ASPRV1Q53RT3 343 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 CCDC174Q6PII3 467 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 AGBL1Q96MI9 1066 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 NEK1Q96PY6 1258 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 MTA3Q9BTC8 594 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 SENP2Q9HC62 589 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 SLC5A4Q9NY91 659 aa20.4■□□□□ 0.86
SMIM11A-202ENST00000399295 COL11A1P12107 1806 aaPredicted RBP20.39■□□□□ 0.86
SMIM11A-202ENST00000399295 CCL5P13501 91 aa20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 KRT32Q14532 448 aa20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 CHST13Q8NET6 341 aa20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 IPO9Q96P70 1041 aaKnown RBP20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 RANBP17Q9H2T7 1088 aaKnown RBP20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 FBXO40Q9UH90 709 aa20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 PLXNB2O15031 1838 aa20.39■□□□□ 0.85
SMIM11A-202ENST00000399295 COBLO75128 1261 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 HSPA4P34932 840 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 COL9A3Q14050 684 aaPredicted RBP20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 CATIPQ7Z7H3 387 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 NPLOC4Q8TAT6 608 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 TMEM87BQ96K49 555 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 RNF208Q9H0X6 261 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 UNC93B1Q9H1C4 597 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 HOMER2Q9NSB8 354 aa20.38■□□□□ 0.85
SMIM11A-202ENST00000399295 POTEFA5A3E0 1075 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 SLC34A2O95436 690 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 ICAM1P05362 532 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 TRIM32Q13049 653 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 BECN1Q14457 450 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 TKFCQ3LXA3 575 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 TMTC2Q8N394 836 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 KCNB2Q92953 911 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 IL17RAQ96F46 866 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 DDX11Q96FC9 970 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 CPVLQ9H3G5 476 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 LY9Q9HBG7 655 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 GPHNQ9NQX3 736 aaPredicted RBP20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 FLRT1Q9NZU1 646 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 CCPG1Q9ULG6 757 aa20.37■□□□□ 0.85
SMIM11A-202ENST00000399295 SH2B2O14492 632 aaPredicted RBP20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 PGK2P07205 417 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 ALAS1P13196 640 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 TROAPQ12815 778 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 RABEP1Q15276 862 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 ADCK5Q3MIX3 580 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 MFSD14CQ5VZR4 134 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 ANKRD35Q8N283 1001 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 STAG2Q8N3U4 1231 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 TRERF1Q96PN7 1200 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 ACAD9Q9H845 621 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 RNF146Q9NTX7 359 aa20.36■□□□□ 0.85
SMIM11A-202ENST00000399295 DHX16O60231 1041 aaKnown RBP20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 GJB1P08034 283 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 PRKAR2AP13861 404 aaKnown RBP20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 LIFRP42702 1097 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 OLFML2BQ68BL8 750 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 NFXL1Q6ZNB6 911 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 DHX32Q7L7V1 743 aaKnown RBP20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 ADGRF4Q8IZF3 695 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 KIF2CQ99661 725 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 LRRC2Q9BYS8 371 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 HMX1Q9NP08 348 aaPredicted RBP20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 PNMA2Q9UL42 364 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 SNX14Q9Y5W7 946 aa20.35■□□□□ 0.85
SMIM11A-202ENST00000399295 RPTORQ8N122 1335 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 PALM3A6NDB9 673 aaPredicted RBP20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 CCDC69A6NI79 296 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 KLRF2D3W0D1 207 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 HMGB1P09429 215 aaKnown RBP20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 EXOSC10Q01780 885 aaKnown RBP20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 CACNB2Q08289 660 aaPredicted RBP20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 GRM4Q14833 912 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 ZNF792Q3KQV3 632 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 MAP3K21Q5TCX8 1036 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 NUP133Q8WUM0 1156 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 MAML3Q96JK9 1138 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 VAT1LQ9HCJ6 419 aa20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 DIS3Q9Y2L1 958 aaKnown RBP20.34■□□□□ 0.85
SMIM11A-202ENST00000399295 WDR19Q8NEZ3 1342 aa20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 ZNF236Q9UL36 1845 aa20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 EN2P19622 333 aaPredicted RBP20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 CYP2C19P33261 490 aa20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 JAKMIP1Q96N16 626 aaKnown RBP20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 JMJD4Q9H9V9 463 aa20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 PAK6Q9NQU5 681 aaPredicted RBP20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 DAXXQ9UER7 740 aaPredicted RBP20.33■□□□□ 0.85
SMIM11A-202ENST00000399295 DNAJC25-GNG10A0A024R161 153 aa20.32■□□□□ 0.84
SMIM11A-202ENST00000399295 DDAH1O94760 285 aa20.32■□□□□ 0.84
SMIM11A-202ENST00000399295 IGHA2P01877 340 aa20.32■□□□□ 0.84
SMIM11A-202ENST00000399295 TAL1P17542 331 aaPredicted RBP20.32■□□□□ 0.84
SMIM11A-202ENST00000399295 CDC37Q16543 378 aaPredicted RBP20.32■□□□□ 0.84
SMIM11A-202ENST00000399295 MUM1L1Q5H9M0 696 aa20.32■□□□□ 0.84
SMIM11A-202ENST00000399295 DEFB118Q96PH6 123 aa20.32■□□□□ 0.84
SMIM11A-202ENST00000399295 MAP3K14Q99558 947 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms