RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 LRRC10BA6NIK2 292 aa15.4■□□□□ 0.06
COL6A2-203ENST00000397763 UBA7P41226 1012 aa15.4■□□□□ 0.06
COL6A2-203ENST00000397763 USP17L3A6NCW0 530 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 USP17L4A6NCW7 530 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 ATP6V1AP38606 617 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 MAGEA9P43362 315 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 USP17L1Q7RTZ2 530 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 SLC44A5Q8NCS7 719 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 VAT1LQ9HCJ6 419 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 FAM207AQ9NSI2 230 aaPredicted RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 MAGEC2Q9UBF1 373 aaPredicted RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 LRWD1Q9UFC0 647 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 ITIH6Q6UXX5 1313 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 NCK2O43639 380 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 MTIF2P46199 727 aaKnown RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 ENOX2Q16206 610 aaKnown RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 CCDC96Q2M329 555 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 ADSSL1Q8N142 457 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 SMARCC1Q92922 1105 aaPredicted RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 TUBGCP2Q9BSJ2 902 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 NHEJ1Q9H9Q4 299 aaPredicted RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 RNASE9P60153 205 aaKnown RBP15.39■□□□□ 0.05
COL6A2-203ENST00000397763 STK4Q13043 487 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 FAM71BQ8TC56 605 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 COG1Q8WTW3 980 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 DISC1Q9NRI5 854 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 HPCAL4Q9UM19 191 aa15.39■□□□□ 0.05
COL6A2-203ENST00000397763 UBR2Q8IWV8 1755 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 CCDC194A0A1B0GVG4 234 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 LGALS16A8MUM7 142 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 SEMA3EO15041 775 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 LIG3P49916 1009 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 SPAG1Q07617 926 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 STIM1Q13586 685 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 DTHD1Q6ZMT9 781 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 BLIDQ8IZY5 108 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 AFAP1L1Q8TED9 768 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 MCM9Q9NXL9 1143 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 COL4A1P02462 1669 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 EPHB6O15197 1021 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 CRKLP46109 303 aaKnown RBP15.38■□□□□ 0.05
COL6A2-203ENST00000397763 MECOMQ03112 1051 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 ANKRD40Q6AI12 368 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 ACBD3Q9H3P7 528 aa15.38■□□□□ 0.05
COL6A2-203ENST00000397763 DMGDHQ9UI17 866 aaKnown RBP15.38■□□□□ 0.05
COL6A2-203ENST00000397763 MOCS3O95396 460 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 TFAP4Q01664 338 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 CELF1Q92879 486 aaKnown RBP15.37■□□□□ 0.05
COL6A2-203ENST00000397763 CRACR2AQ9BSW2 395 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 SELENOOQ9BVL4 669 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 GBP3Q9H0R5 595 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 SLC39A2Q9NP94 309 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 COL1A1P02452 1464 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-203ENST00000397763 H7C1D1 291 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 ZNF263O14978 683 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 ASIC1P78348 528 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 PDE4DQ08499 809 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 PTPROQ16827 1216 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 LETM2Q2VYF4 491 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 ERFEQ4G0M1 354 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 SND1Q7KZF4 910 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL6A2-203ENST00000397763 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 C4orf32Q8N8J7 132 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 DEF6Q9H4E7 631 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 HAUS4Q9H6D7 363 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 KANSL2Q9H9L4 492 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 RBM28Q9NW13 759 aaKnown RBP15.37■□□□□ 0.05
COL6A2-203ENST00000397763 CAPN6Q9Y6Q1 641 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 NID2Q14112 1375 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 IL6STP40189 918 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-203ENST00000397763 LRRC1Q9BTT6 524 aa15.37■□□□□ 0.05
COL6A2-203ENST00000397763 DCP1AQ9NPI6 582 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-203ENST00000397763 TAF1P21675 1872 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 IPO7O95373 1038 aaKnown RBP15.36■□□□□ 0.05
COL6A2-203ENST00000397763 BMP15O95972 392 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 FECHP22830 423 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 CCT5P48643 541 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 PFKFB3Q16875 520 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-203ENST00000397763 NFRKBQ6P4R8 1299 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 ZNF507Q8TCN5 953 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-203ENST00000397763 CNOT6LQ96LI5 555 aaKnown RBP15.36■□□□□ 0.05
COL6A2-203ENST00000397763 DUSP9Q99956 384 aaKnown RBP15.36■□□□□ 0.05
COL6A2-203ENST00000397763 NOC4LQ9BVI4 516 aaKnown RBP15.36■□□□□ 0.05
COL6A2-203ENST00000397763 SLAIN2Q9P270 581 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 PSMA7O14818 248 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 KLRC4O43908 158 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 PLCG1P19174 1290 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 SLC35G1Q2M3R5 365 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 INTS5Q6P9B9 1019 aaKnown RBP15.36■□□□□ 0.05
COL6A2-203ENST00000397763 DYMQ7RTS9 669 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 PPM1EQ8WY54 764 aa15.36■□□□□ 0.05
COL6A2-203ENST00000397763 PSMD14O00487 310 aa15.35■□□□□ 0.05
COL6A2-203ENST00000397763 BUB1O43683 1085 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms