RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 OGDHLQ9ULD0 1010 aa20.53■□□□□ 0.88
UPK3A-202ENST00000396082 DIS3Q9Y2L1 958 aaKnown RBP20.53■□□□□ 0.88
UPK3A-202ENST00000396082 CYP21A2P08686 494 aa20.52■□□□□ 0.88
UPK3A-202ENST00000396082 ZNF792Q3KQV3 632 aa20.52■□□□□ 0.88
UPK3A-202ENST00000396082 TKFCQ3LXA3 575 aa20.52■□□□□ 0.88
UPK3A-202ENST00000396082 PNMA1Q8ND90 353 aa20.52■□□□□ 0.88
UPK3A-202ENST00000396082 DIS3LQ8TF46 1054 aaKnown RBP20.52■□□□□ 0.88
UPK3A-202ENST00000396082 CCPG1Q9ULG6 757 aa20.52■□□□□ 0.88
UPK3A-202ENST00000396082 ZNF536O15090 1300 aa20.52■□□□□ 0.87
UPK3A-202ENST00000396082 ZNF543Q08ER8 600 aa20.51■□□□□ 0.87
UPK3A-202ENST00000396082 BTNL9Q6UXG8 535 aa20.51■□□□□ 0.87
UPK3A-202ENST00000396082 ENAHQ8N8S7 591 aaPredicted RBP20.51■□□□□ 0.87
UPK3A-202ENST00000396082 TRPV1Q8NER1 839 aa20.51■□□□□ 0.87
UPK3A-202ENST00000396082 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
UPK3A-202ENST00000396082 TINF2Q9BSI4 451 aa20.51■□□□□ 0.87
UPK3A-202ENST00000396082 RBM8AQ9Y5S9 174 aaKnown RBP20.51■□□□□ 0.87
UPK3A-202ENST00000396082 IGHA2P01877 340 aa20.5■□□□□ 0.87
UPK3A-202ENST00000396082 PRAMEF19Q5SWL8 479 aa20.5■□□□□ 0.87
UPK3A-202ENST00000396082 GPATCH4Q5T3I0 446 aaKnown RBP20.5■□□□□ 0.87
UPK3A-202ENST00000396082 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
UPK3A-202ENST00000396082 LHX8Q68G74 356 aa20.5■□□□□ 0.87
UPK3A-202ENST00000396082 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
UPK3A-202ENST00000396082 MAP4K1Q92918 833 aa20.5■□□□□ 0.87
UPK3A-202ENST00000396082 ESYT1Q9BSJ8 1104 aa20.5■□□□□ 0.87
UPK3A-202ENST00000396082 RANBP17Q9H2T7 1088 aaKnown RBP20.5■□□□□ 0.87
UPK3A-202ENST00000396082 ERICH2A1L162 156 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 SEPT4O43236 478 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 ICAM1P05362 532 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 GOLGA8HP0CJ92 632 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 SNHG28P0DPA3 235 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.49■□□□□ 0.87
UPK3A-202ENST00000396082 NCOA7Q8NI08 942 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 ANKS1AQ92625 1134 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 C11orf49Q9H6J7 331 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 ANO2Q9NQ90 1003 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 CNPY2Q9Y2B0 182 aa20.49■□□□□ 0.87
UPK3A-202ENST00000396082 MKI67P46013 3256 aaKnown RBP20.49■□□□□ 0.87
UPK3A-202ENST00000396082 DNAJC25-GNG10A0A024R161 153 aa20.48■□□□□ 0.87
UPK3A-202ENST00000396082 E7EWF7 191 aa20.48■□□□□ 0.87
UPK3A-202ENST00000396082 ANO1Q5XXA6 986 aa20.48■□□□□ 0.87
UPK3A-202ENST00000396082 CYB5R4Q7L1T6 521 aa20.48■□□□□ 0.87
UPK3A-202ENST00000396082 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
UPK3A-202ENST00000396082 NRBP1Q9UHY1 535 aa20.48■□□□□ 0.87
UPK3A-202ENST00000396082 PFASO15067 1338 aa20.48■□□□□ 0.87
UPK3A-202ENST00000396082 POTEB2H3BUK9 544 aa20.47■□□□□ 0.87
UPK3A-202ENST00000396082 DHX16O60231 1041 aaKnown RBP20.47■□□□□ 0.87
UPK3A-202ENST00000396082 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
UPK3A-202ENST00000396082 CENPBP07199 599 aaPredicted RBP20.47■□□□□ 0.87
UPK3A-202ENST00000396082 PARP1P09874 1014 aaKnown RBP20.47■□□□□ 0.87
UPK3A-202ENST00000396082 TAL1P17542 331 aaPredicted RBP20.47■□□□□ 0.87
UPK3A-202ENST00000396082 SART3Q15020 963 aaKnown RBP20.47■□□□□ 0.87
UPK3A-202ENST00000396082 ASPRV1Q53RT3 343 aa20.47■□□□□ 0.87
UPK3A-202ENST00000396082 NSMFQ6X4W1 530 aa20.47■□□□□ 0.87
UPK3A-202ENST00000396082 A1CFQ9NQ94 594 aaKnown RBP20.47■□□□□ 0.87
UPK3A-202ENST00000396082 PNMA2Q9UL42 364 aa20.47■□□□□ 0.87
UPK3A-202ENST00000396082 NR2E3Q9Y5X4 410 aa20.47■□□□□ 0.87
UPK3A-202ENST00000396082 IFIT3O14879 490 aaKnown RBP20.46■□□□□ 0.87
UPK3A-202ENST00000396082 EVI5O60447 810 aa20.46■□□□□ 0.87
UPK3A-202ENST00000396082 CDC45O75419 566 aa20.46■□□□□ 0.87
UPK3A-202ENST00000396082 MNX1P50219 401 aaPredicted RBP20.46■□□□□ 0.87
UPK3A-202ENST00000396082 MUM1L1Q5H9M0 696 aa20.46■□□□□ 0.87
UPK3A-202ENST00000396082 ZNF467Q7Z7K2 595 aaPredicted RBP20.46■□□□□ 0.87
UPK3A-202ENST00000396082 LSG1Q9H089 658 aaKnown RBP20.46■□□□□ 0.87
UPK3A-202ENST00000396082 TAF6LQ9Y6J9 622 aa20.46■□□□□ 0.87
UPK3A-202ENST00000396082 SYNGAP1Q96PV0 1343 aa20.46■□□□□ 0.87
UPK3A-202ENST00000396082 STOX1Q6ZVD7 989 aa20.45■□□□□ 0.86
UPK3A-202ENST00000396082 ARRDC4Q8NCT1 418 aa20.45■□□□□ 0.86
UPK3A-202ENST00000396082 UBA5Q9GZZ9 404 aa20.45■□□□□ 0.86
UPK3A-202ENST00000396082 CPVLQ9H3G5 476 aa20.45■□□□□ 0.86
UPK3A-202ENST00000396082 ZHX1Q9UKY1 873 aaPredicted RBP20.45■□□□□ 0.86
UPK3A-202ENST00000396082 MCM3APO60318 1980 aa20.45■□□□□ 0.86
UPK3A-202ENST00000396082 H0YGN5 161 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 RARBP10826 455 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 AKR1A1P14550 325 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 WTAPQ15007 396 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 SEC23AQ15436 765 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 MAMDC4Q6UXC1 1216 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 CHST3Q7LGC8 479 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 SMCHD1A6NHR9 2005 aa20.44■□□□□ 0.86
UPK3A-202ENST00000396082 ALPK3Q96L96 1907 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 KBTBD13C9JR72 458 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 DNM1LO00429 736 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 CNTN2Q02246 1040 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 CDC37Q16543 378 aaPredicted RBP20.43■□□□□ 0.86
UPK3A-202ENST00000396082 ARMCX2Q7L311 632 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 FAM133AQ8N9E0 248 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.43■□□□□ 0.86
UPK3A-202ENST00000396082 WDR19Q8NEZ3 1342 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 MYH6P13533 1939 aa20.43■□□□□ 0.86
UPK3A-202ENST00000396082 PTPDC1A2A3K4 754 aa20.42■□□□□ 0.86
UPK3A-202ENST00000396082 SNAI1O95863 264 aaPredicted RBP20.42■□□□□ 0.86
UPK3A-202ENST00000396082 ZNF865P0CJ78 1059 aaPredicted RBP20.42■□□□□ 0.86
UPK3A-202ENST00000396082 USH1GQ495M9 461 aa20.42■□□□□ 0.86
UPK3A-202ENST00000396082 TMEM67Q5HYA8 995 aa20.42■□□□□ 0.86
UPK3A-202ENST00000396082 GJC2Q5T442 439 aaPredicted RBP20.42■□□□□ 0.86
UPK3A-202ENST00000396082 FGD4Q96M96 766 aa20.42■□□□□ 0.86
UPK3A-202ENST00000396082 SENP6Q9GZR1 1112 aaPredicted RBP20.42■□□□□ 0.86
UPK3A-202ENST00000396082 XPNPEP3Q9NQH7 507 aa20.42■□□□□ 0.86
UPK3A-202ENST00000396082 CYP39A1Q9NYL5 469 aa20.42■□□□□ 0.86
UPK3A-202ENST00000396082 ASB14A6NK59 587 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms