RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 MORC2Q9Y6X9 1032 aaPredicted RBP21.74■■□□□ 1.07
CLDND1-203ENST00000394181 STX1AQ16623 288 aa21.73■■□□□ 1.07
CLDND1-203ENST00000394181 CCDC84Q86UT8 332 aaPredicted RBP21.73■■□□□ 1.07
CLDND1-203ENST00000394181 SYMPKQ92797 1274 aaKnown RBP21.73■■□□□ 1.07
CLDND1-203ENST00000394181 TMEM60Q9H2L4 133 aa21.73■■□□□ 1.07
CLDND1-203ENST00000394181 ZBTB5O15062 677 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 GNA11P29992 359 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 PLCB2Q00722 1185 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 GRAMD1CQ8IYS0 662 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 CNNM3Q8NE01 707 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 GMCL1P1Q8NEA9 526 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 FERMT2Q96AC1 680 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 SERTAD1Q9UHV2 236 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 BMP15O95972 392 aa21.72■■□□□ 1.07
CLDND1-203ENST00000394181 RPS12P25398 132 aaKnown RBP21.72■■□□□ 1.07
CLDND1-203ENST00000394181 MDM2Q00987 491 aaPredicted RBP21.72■■□□□ 1.07
CLDND1-203ENST00000394181 DPCR1Q3MIW9 517 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 ESYT2A0FGR8 921 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 TBC1D12O60347 775 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 ADCY5O95622 1261 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 IQCB1Q15051 598 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 UBE2SQ16763 222 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 QRICH1Q2TAL8 776 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 ARHGAP27Q6ZUM4 889 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 FAM177A1Q8N128 213 aaPredicted RBP21.71■■□□□ 1.07
CLDND1-203ENST00000394181 REXO1Q8N1G1 1221 aaKnown RBP21.71■■□□□ 1.07
CLDND1-203ENST00000394181 TEPSINQ96N21 525 aa21.71■■□□□ 1.07
CLDND1-203ENST00000394181 GLIS2Q9BZE0 524 aaPredicted RBP21.71■■□□□ 1.07
CLDND1-203ENST00000394181 TMEM232C9JQI7 657 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 TAL1P17542 331 aaPredicted RBP21.7■■□□□ 1.06
CLDND1-203ENST00000394181 CDC25AP30304 524 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 ADCY7P51828 1080 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 KRT25Q7Z3Z0 450 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 GMCL1Q96IK5 515 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 ACTN4O43707 911 aaKnown RBP21.7■■□□□ 1.06
CLDND1-203ENST00000394181 EDIL3O43854 480 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 PRR29P0C7W0 189 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 NONOQ15233 471 aaKnown RBP eCLIP21.7■■□□□ 1.06
CLDND1-203ENST00000394181 LETM2Q2VYF4 491 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 TBCKQ8TEA7 893 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 DPF2Q92785 391 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 FHDC1Q9C0D6 1143 aaPredicted RBP21.7■■□□□ 1.06
CLDND1-203ENST00000394181 SPON1Q9HCB6 807 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 ANO10Q9NW15 660 aa21.7■■□□□ 1.06
CLDND1-203ENST00000394181 CAP2P40123 477 aa21.69■■□□□ 1.06
CLDND1-203ENST00000394181 DHX58Q96C10 678 aa21.69■■□□□ 1.06
CLDND1-203ENST00000394181 HACL1Q9UJ83 578 aa21.69■■□□□ 1.06
CLDND1-203ENST00000394181 hCG_1984214I3L0E3 225 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 BMP3P12645 472 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 MAP3K10Q02779 954 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 ZYXQ15942 572 aaKnown RBP21.68■■□□□ 1.06
CLDND1-203ENST00000394181 CDC37Q16543 378 aaPredicted RBP21.68■■□□□ 1.06
CLDND1-203ENST00000394181 ZNF713Q8N859 430 aaPredicted RBP21.68■■□□□ 1.06
CLDND1-203ENST00000394181 TUBE1Q9UJT0 475 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 PHF20L1A8MW92 1017 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 CCNT1O60563 726 aaKnown RBP21.68■■□□□ 1.06
CLDND1-203ENST00000394181 DHX40Q8IX18 779 aaKnown RBP21.68■■□□□ 1.06
CLDND1-203ENST00000394181 RIC8AQ9NPQ8 531 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 TMX2Q9Y320 296 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 PCDHA5Q9Y5H7 936 aa21.68■■□□□ 1.06
CLDND1-203ENST00000394181 IKQ13123 557 aaPredicted RBP21.67■■□□□ 1.06
CLDND1-203ENST00000394181 PCDHA1Q9Y5I3 950 aa21.67■■□□□ 1.06
CLDND1-203ENST00000394181 PP2D1A8MPX8 630 aa21.67■■□□□ 1.06
CLDND1-203ENST00000394181 KIF4BQ2VIQ3 1234 aa21.67■■□□□ 1.06
CLDND1-203ENST00000394181 TRIM44Q96DX7 344 aaPredicted RBP21.67■■□□□ 1.06
CLDND1-203ENST00000394181 ARHGEF10LQ9HCE6 1279 aa21.67■■□□□ 1.06
CLDND1-203ENST00000394181 TNNI2P48788 182 aa21.66■■□□□ 1.06
CLDND1-203ENST00000394181 NLRP12P59046 1061 aa21.66■■□□□ 1.06
CLDND1-203ENST00000394181 PRAMEF18Q5VWM3 479 aa21.66■■□□□ 1.06
CLDND1-203ENST00000394181 NEK8Q86SG6 692 aa21.66■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L15C9J2P7 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L13C9JLJ4 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L11C9JVI0 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L18D6R9N7 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L22D6RA61 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L17D6RBQ6 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L19D6RCP7 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L20D6RJB6 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 CASP1P29466 404 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L24Q0WX57 530 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 POSTNQ15063 836 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 FAM83BQ5T0W9 1011 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 SYDE2Q5VT97 1194 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 ARL6IP4Q66PJ3 421 aaKnown RBP21.65■■□□□ 1.06
CLDND1-203ENST00000394181 USP17L6PQ6QN14 398 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 DEFB129Q9H1M3 183 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 PSTPIP2Q9H939 334 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 ARFGEF1Q9Y6D6 1849 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 BMP6P22004 513 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 CLK2P49760 499 aaKnown RBP21.65■■□□□ 1.06
CLDND1-203ENST00000394181 PPP1R18Q6NYC8 613 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 TRPM4Q8TD43 1214 aa21.65■■□□□ 1.06
CLDND1-203ENST00000394181 NBPF12Q5TAG4 269 aaPredicted RBP21.64■■□□□ 1.06
CLDND1-203ENST00000394181 DTHD1Q6ZMT9 781 aa21.64■■□□□ 1.06
CLDND1-203ENST00000394181 CAVIN2O95810 425 aa21.64■■□□□ 1.05
CLDND1-203ENST00000394181 AFMP43652 599 aa21.64■■□□□ 1.05
CLDND1-203ENST00000394181 ZRSR1Q15695 479 aaKnown RBP21.64■■□□□ 1.05
CLDND1-203ENST00000394181 USH1GQ495M9 461 aa21.64■■□□□ 1.05
CLDND1-203ENST00000394181 CEP57L1Q8IYX8 460 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms