RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 NEK8Q86SG6 692 aa10.24□□□□□ -0.77
TDP1-202ENST00000393452 C2CD5Q86YS7 1000 aa10.24□□□□□ -0.77
TDP1-202ENST00000393452 LRRC47Q8N1G4 583 aaKnown RBP10.24□□□□□ -0.77
TDP1-202ENST00000393452 STAMQ92783 540 aa10.24□□□□□ -0.77
TDP1-202ENST00000393452 ZNF622Q969S3 477 aaKnown RBP eCLIP10.24□□□□□ -0.77
TDP1-202ENST00000393452 AK8Q96MA6 479 aa10.24□□□□□ -0.77
TDP1-202ENST00000393452 DBNDD1Q9H9R9 158 aa10.24□□□□□ -0.77
TDP1-202ENST00000393452 KCNQ5Q9NR82 932 aa10.24□□□□□ -0.77
TDP1-202ENST00000393452 G3V3G9 751 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 H0YIN7 160 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 CTIFO43310 598 aaKnown RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 NPM3O75607 178 aaKnown RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 HLA-DOAP06340 250 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 RXRBP28702 533 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 STAT6P42226 847 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 ZNF543Q08ER8 600 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 HSP90AA4PQ58FG1 418 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 DCAF8Q5TAQ9 597 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 MSL1Q68DK7 614 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 SMYD4Q8IYR2 804 aaPredicted RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 REXO1Q8N1G1 1221 aaKnown RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 CCDC17Q96LX7 622 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 IDI2Q9BXS1 227 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 BLZF1Q9H2G9 400 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 FRMPD2Q68DX3 1309 aaPredicted RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 KIF2AO00139 706 aaPredicted RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 OR52Z1P0C646 297 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 ZNF658Q5TYW1 1059 aaPredicted RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 CEP135Q66GS9 1140 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 SPECC1LQ69YQ0 1117 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 CLEC10AQ8IUN9 316 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 TMEM139Q8IV31 216 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 C7orf43Q8WVR3 580 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 DHX36Q9H2U1 1008 aaKnown RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 DNAJC18Q9H819 358 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 VAT1LQ9HCJ6 419 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 KBTBD4Q9NVX7 518 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 RMND1Q9NWS8 449 aa10.23□□□□□ -0.77
TDP1-202ENST00000393452 TRMT1Q9NXH9 659 aaKnown RBP10.23□□□□□ -0.77
TDP1-202ENST00000393452 PNMA6FA0A0J9YX94 578 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 RPN1P04843 607 aaKnown RBP10.22□□□□□ -0.77
TDP1-202ENST00000393452 UBA7P41226 1012 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 GPATCH4Q5T3I0 446 aaKnown RBP10.22□□□□□ -0.77
TDP1-202ENST00000393452 RRAGBQ5VZM2 374 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 KLHL10Q6JEL2 608 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 TBCKQ8TEA7 893 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 MTMR8Q96EF0 704 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 CUEDC2Q9H467 287 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 RWDD2AQ9UIY3 292 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 LRRC10BA6NIK2 292 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 PP2D1A8MPX8 630 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 ECE2O60344 883 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 CCNT1O60563 726 aaKnown RBP10.22□□□□□ -0.77
TDP1-202ENST00000393452 PBX1P40424 430 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 EIF6P56537 245 aaKnown RBP10.22□□□□□ -0.77
TDP1-202ENST00000393452 STX17P56962 302 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 KCNB1Q14721 858 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 LETM2Q2VYF4 491 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 PPP1R18Q6NYC8 613 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 FCHSD1Q86WN1 690 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 ZFPM1Q8IX07 1006 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 PPP1R13BQ96KQ4 1090 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 CTAGE1Q96RT6 745 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 JMJD4Q9H9V9 463 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 MAGEF1Q9HAY2 307 aa10.22□□□□□ -0.77
TDP1-202ENST00000393452 ADD3Q9UEY8 706 aaKnown RBP10.22□□□□□ -0.77
TDP1-202ENST00000393452 EDIL3O43854 480 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 ADGRF4Q8IZF3 695 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 IGSF22Q8N9C0 903 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 TC2NQ8N9U0 490 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 LRRC15Q8TF66 581 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 CNKSR1Q969H4 720 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 COA7Q96BR5 231 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 BIN2Q9UBW5 565 aaPredicted RBP10.21□□□□□ -0.77
TDP1-202ENST00000393452 FAM198AQ9UFP1 575 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 SERPINA10Q9UK55 444 aa10.21□□□□□ -0.77
TDP1-202ENST00000393452 ARHGAP6O43182 974 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 KLRC4O43908 158 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.78
TDP1-202ENST00000393452 TUBB4AP04350 444 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 ADCY7P51828 1080 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 PAK1Q13153 545 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 PTPN21Q16825 1174 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 JAKMIP3Q5VZ66 844 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 MKL1Q969V6 931 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 MTMR9Q96QG7 549 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 RIC8AQ9NPQ8 531 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 PI4KBQ9UBF8 816 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 CTNND2Q9UQB3 1225 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 PCDHAC2Q9Y5I4 1007 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 PSME4Q14997 1843 aa10.21□□□□□ -0.78
TDP1-202ENST00000393452 MYH7BA7E2Y1 1941 aa10.2□□□□□ -0.78
TDP1-202ENST00000393452 DDTLA6NHG4 134 aaPredicted RBP10.2□□□□□ -0.78
TDP1-202ENST00000393452 TEX33O43247 280 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms