RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 HELLSQ9NRZ9 838 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 CAPN7Q9Y6W3 813 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 IVNS1ABPQ9Y6Y0 642 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 NUDCD3Q8IVD9 361 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 SAR1BQ9Y6B6 198 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 PDE6BP35913 854 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 SNX1Q13596 522 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 MRRFQ96E11 262 aaKnown RBP16.07■□□□□ 0.16
CCDC50-201ENST00000392455 YY1AP1Q9H869 796 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 MEIS1O00470 390 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 MAEAQ7L5Y9 396 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 DDX42Q86XP3 938 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCDC50-201ENST00000392455 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 CHCHD3Q9NX63 227 aaKnown RBP16.07■□□□□ 0.16
CCDC50-201ENST00000392455 SLC8A2Q9UPR5 921 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCDC50-201ENST00000392455 C4BPBP20851 252 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 ZSCAN26Q16670 478 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 C16orf87Q6PH81 154 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 FGD4Q96M96 766 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 TTLL3Q9Y4R7 772 aa16.07■□□□□ 0.16
CCDC50-201ENST00000392455 B4E1Z4 1266 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 NVLO15381 856 aaKnown RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 MCF2P10911 925 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 PDE4DQ08499 809 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 FLT4P35916 1363 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 DDX39AO00148 427 aaKnown RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 CSGALNACT2Q8N6G5 542 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 STX18Q9P2W9 335 aaKnown RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 CAPN9O14815 690 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 NSFP46459 744 aaKnown RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 ZSCAN32Q9NX65 697 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 DNM3Q9UQ16 869 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 INHBAP08476 426 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 CNBD1Q8NA66 436 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 SKA2Q8WVK7 121 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 ZNF408Q9H9D4 720 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 SOS2Q07890 1332 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 ZNF189O75820 626 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 MRPL28Q13084 256 aaKnown RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 ZYXQ15942 572 aaKnown RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 ANKRD35Q8N283 1001 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.06■□□□□ 0.16
CCDC50-201ENST00000392455 DEXIO95424 95 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 PIK3AP1Q6ZUJ8 805 aa16.06■□□□□ 0.16
CCDC50-201ENST00000392455 DYNC1I2Q13409 638 aaKnown RBP16.05■□□□□ 0.16
CCDC50-201ENST00000392455 SYCP2Q9BX26 1530 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 STAT1P42224 750 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
CCDC50-201ENST00000392455 CAPS2Q9BXY5 557 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 SYCE1LA8MT33 242 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 PPP1R12AO14974 1030 aaPredicted RBP16.05■□□□□ 0.16
CCDC50-201ENST00000392455 ATP5HO75947 161 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 PYGMP11217 842 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 XPAP23025 273 aaPredicted RBP16.05■□□□□ 0.16
CCDC50-201ENST00000392455 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
CCDC50-201ENST00000392455 CHMP6Q96FZ7 201 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 VPS16Q9H269 839 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 MTRQ99707 1265 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 NPATQ14207 1427 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 TMED1Q13445 227 aa16.05■□□□□ 0.16
CCDC50-201ENST00000392455 HNRNPRO43390 633 aaKnown RBP16.04■□□□□ 0.16
CCDC50-201ENST00000392455 BPIFB4P59827 614 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 ARHGEF18Q6ZSZ5 1173 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 KIF9Q9HAQ2 790 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 GINS2Q9Y248 185 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 ITGA6P23229 1130 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 DHX38Q92620 1227 aaKnown RBP16.04■□□□□ 0.16
CCDC50-201ENST00000392455 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 CCDC197Q8NCU1 140 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 CUTAO60888 179 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 KLHL30Q0D2K2 578 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 KRT82Q9NSB4 513 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 MAPK8IP1Q9UQF2 711 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 RNMTO43148 476 aaKnown RBP16.04■□□□□ 0.16
CCDC50-201ENST00000392455 PUM3Q15397 648 aaKnown RBP16.04■□□□□ 0.16
CCDC50-201ENST00000392455 TACO1Q9BSH4 297 aaKnown RBP16.04■□□□□ 0.16
CCDC50-201ENST00000392455 SLC12A6Q9UHW9 1150 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 GOLGA8TH3BQL2 631 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 GOLGA8HP0CJ92 632 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 RANBP1P43487 201 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 ART3Q13508 389 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 PPP6R3Q5H9R7 873 aaPredicted RBP16.04■□□□□ 0.16
CCDC50-201ENST00000392455 NDUFAF2Q8N183 169 aa16.04■□□□□ 0.16
CCDC50-201ENST00000392455 CALR3Q96L12 384 aaKnown RBP16.04■□□□□ 0.16
CCDC50-201ENST00000392455 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 NCAPH2Q6IBW4 605 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 EXOC8Q8IYI6 725 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 XPOTO43592 962 aaKnown RBP16.03■□□□□ 0.16
CCDC50-201ENST00000392455 CHMLP26374 656 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 AOC3Q16853 763 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 GOLGA8JA6NMD2 632 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 GOLGA8MH3BSY2 632 aa16.03■□□□□ 0.16
CCDC50-201ENST00000392455 USH1GQ495M9 461 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms