RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ST14Q9Y5Y6 855 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 QRICH2Q9H0J4 1663 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 PPLO60437 1756 aa4.75□□□□□ -1.65
SMC6-202ENST00000381272 NKTRP30414 1462 aaKnown RBP4.75□□□□□ -1.65
SMC6-202ENST00000381272 E9PSI1 815 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 H3BS24 57 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 TLR3O15455 904 aaKnown RBP4.74□□□□□ -1.65
SMC6-202ENST00000381272 GREM1O60565 184 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 TNK2Q07912 1038 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 THAP5Q7Z6K1 395 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 ZNF296Q8WUU4 475 aaPredicted RBP4.74□□□□□ -1.65
SMC6-202ENST00000381272 LRRC3Q9BY71 257 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 C14orf93Q9H972 538 aaKnown RBP4.74□□□□□ -1.65
SMC6-202ENST00000381272 ATP13A1Q9HD20 1204 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 ZC3H13Q5T200 1668 aaKnown RBP4.74□□□□□ -1.65
SMC6-202ENST00000381272 MYO3AQ8NEV4 1616 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 NRXN1Q9ULB1 1477 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 SHPRHQ149N8 1683 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 ADGRB3O60242 1522 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 IGHDP01880 384 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 CANXP27824 592 aaKnown RBP4.74□□□□□ -1.65
SMC6-202ENST00000381272 LRRN4CLQ8ND94 238 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 PANK1Q8TE04 598 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 PPP1R13LQ8WUF5 828 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 FRAT1Q92837 279 aaPredicted RBP4.74□□□□□ -1.65
SMC6-202ENST00000381272 UBE2FQ969M7 185 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 PRDM7Q9NQW5 492 aa4.74□□□□□ -1.65
SMC6-202ENST00000381272 ZNF518AQ6AHZ1 1483 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 NPATQ14207 1427 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 CD109Q6YHK3 1445 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 LMTK2Q8IWU2 1503 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 RBM47A0AV96 593 aaKnown RBP4.73□□□□□ -1.65
SMC6-202ENST00000381272 CHURC1-FNTBB4DL54 471 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 PAPLNO95428 1278 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 TNNI2P48788 182 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 MTHFSP49914 203 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 SAFB2Q14151 953 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMC6-202ENST00000381272 TCP11L2Q8N4U5 519 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 CCDC74BQ96LY2 380 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 CARS2Q9HA77 564 aaKnown RBP4.73□□□□□ -1.65
SMC6-202ENST00000381272 BRMS1Q9HCU9 246 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 ZSWIM5Q9P217 1185 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 ADAMTS1Q9UHI8 967 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 KCNH3Q9ULD8 1083 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 TNNQ9UQP3 1299 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 POLR3AO14802 1390 aaPredicted RBP4.73□□□□□ -1.65
SMC6-202ENST00000381272 FRMPD1Q5SYB0 1578 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 SETBP1Q9Y6X0 1596 aa4.73□□□□□ -1.65
SMC6-202ENST00000381272 SIGLEC1Q9BZZ2 1709 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 RAPGEF3O95398 923 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 ZNF76P36508 570 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 LDLRAD1Q5T700 205 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 PHACTR4Q8IZ21 702 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 RNF141Q8WVD5 230 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 RUNDC1Q96C34 613 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 Q96M66 194 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 STK26Q9P289 416 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 PCDHB14Q9Y5E9 798 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 ADGRB1O14514 1584 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 SBNO2Q9Y2G9 1366 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 PPM1GO15355 546 aaPredicted RBP4.72□□□□□ -1.65
SMC6-202ENST00000381272 ATE1O95260 518 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 CRKP46108 304 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 CHMP4BP1P59074 171 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 APOBRQ0VD83 1088 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 TMPRSS7Q7RTY8 843 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 FLAD1Q8NFF5 587 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 TRIT1Q9H3H1 467 aaKnown RBP4.72□□□□□ -1.65
SMC6-202ENST00000381272 UBP1Q9NZI7 540 aa4.72□□□□□ -1.65
SMC6-202ENST00000381272 POGZQ7Z3K3 1410 aa4.71□□□□□ -1.65
SMC6-202ENST00000381272 RPGRIP1LQ68CZ1 1315 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 GLI2P10070 1586 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 HECW2Q9P2P5 1572 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 MYO5BQ9ULV0 1848 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 SLC22A31A6NKX4 558 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 DNAJA2O60884 412 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 RARSP54136 660 aaKnown RBP4.71□□□□□ -1.66
SMC6-202ENST00000381272 SEZ6Q53EL9 994 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 DTWD2Q8NBA8 298 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 BAHD1Q8TBE0 780 aaPredicted RBP4.71□□□□□ -1.66
SMC6-202ENST00000381272 CFAP53Q96M91 514 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 NT5C1AQ9BXI3 368 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 METTL5Q9NRN9 209 aaKnown RBP4.71□□□□□ -1.66
SMC6-202ENST00000381272 GPATCH2Q9NW75 528 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 GMIPQ9P107 970 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 CAMSAP1Q5T5Y3 1602 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 ABCC3O15438 1527 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 CGNL1Q0VF96 1302 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 EVC2Q86UK5 1308 aa4.71□□□□□ -1.66
SMC6-202ENST00000381272 MLH3Q9UHC1 1453 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 ARHGEF28Q8N1W1 1705 aaKnown RBP4.7□□□□□ -1.66
SMC6-202ENST00000381272 TULP4Q9NRJ4 1543 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 RGS13O14921 159 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
SMC6-202ENST00000381272 RAG1P15918 1043 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 GBP1P32455 592 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMC6-202ENST00000381272 IDI1Q13907 227 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 KIAA0825Q8IV33 1275 aa4.7□□□□□ -1.66
SMC6-202ENST00000381272 WDR63Q8IWG1 891 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms