RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 REC8O95072 547 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 CLTBP09497 229 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 SNX17Q15036 470 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 ZNF697Q5TEC3 545 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 CCDC129Q6ZRS4 1044 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 SH3RF1Q7Z6J0 888 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 SLC38A10Q9HBR0 1119 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 STX8Q9UNK0 236 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 TSPY2A6NKD2 308 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 DLL1O00548 723 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 SGSM2O43147 1006 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 SHHQ15465 462 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 MSL3Q8N5Y2 521 aaKnown RBP16.19■□□□□ 0.18
PRPF18-202ENST00000378572 NEDD1Q8NHV4 660 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 STARD7Q9NQZ5 370 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 TOMM22Q9NS69 142 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
PRPF18-202ENST00000378572 PLIN4Q96Q06 1357 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 RAG1P15918 1043 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 SLC1A4P43007 532 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 STAT2P52630 851 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
PRPF18-202ENST00000378572 C9orf50Q5SZB4 431 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
PRPF18-202ENST00000378572 SYNPO2Q9UMS6 1093 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
PRPF18-202ENST00000378572 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 ATP2A1O14983 1001 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 C6orf222P0C671 652 aaPredicted RBP16.17■□□□□ 0.18
PRPF18-202ENST00000378572 ACLYP53396 1101 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 CTDSPL2Q05D32 466 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 PPP4R3BQ5MIZ7 849 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
PRPF18-202ENST00000378572 CHST13Q8NET6 341 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 MKL1Q969V6 931 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 TRIM43Q96BQ3 446 aaPredicted RBP16.17■□□□□ 0.18
PRPF18-202ENST00000378572 ACAD9Q9H845 621 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 TMEM39AQ9NV64 488 aa16.17■□□□□ 0.18
PRPF18-202ENST00000378572 RANBP6O60518 1105 aaKnown RBP16.16■□□□□ 0.18
PRPF18-202ENST00000378572 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 SNAI1O95863 264 aaPredicted RBP16.16■□□□□ 0.18
PRPF18-202ENST00000378572 MCCP23508 829 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 OAZ1P54368 228 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 NMIQ13287 307 aaPredicted RBP16.16■□□□□ 0.18
PRPF18-202ENST00000378572 ACVR2BQ13705 512 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 CCDC96Q2M329 555 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 C1orf53Q5VUE5 145 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 CCDC174Q6PII3 467 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 CWC27Q6UX04 472 aaKnown RBP16.16■□□□□ 0.18
PRPF18-202ENST00000378572 FAM160B2Q86V87 743 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 CHURC1Q8WUH1 139 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 RNF146Q9NTX7 359 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 COL6A3P12111 3177 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 DNAJC25-GNG10A0A024R161 153 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 DCDC2CA8MYV0 355 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 POTEB2H3BUK9 544 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 KCTD1Q719H9 257 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 ARMCX2Q7L311 632 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
PRPF18-202ENST00000378572 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
PRPF18-202ENST00000378572 GLT1D1Q96MS3 346 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 TBC1D32Q96NH3 1257 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 HELLSQ9NRZ9 838 aa16.16■□□□□ 0.18
PRPF18-202ENST00000378572 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
PRPF18-202ENST00000378572 MOXD2PA6NHM9 499 aa16.15■□□□□ 0.18
PRPF18-202ENST00000378572 FDX1P10109 184 aa16.15■□□□□ 0.18
PRPF18-202ENST00000378572 ALAS1P13196 640 aa16.15■□□□□ 0.18
PRPF18-202ENST00000378572 KCNA10Q16322 511 aa16.15■□□□□ 0.18
PRPF18-202ENST00000378572 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
PRPF18-202ENST00000378572 MAMDC4Q6UXC1 1216 aa16.15■□□□□ 0.18
PRPF18-202ENST00000378572 TSEN34Q9BSV6 310 aaKnown RBP16.15■□□□□ 0.18
PRPF18-202ENST00000378572 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
PRPF18-202ENST00000378572 A0A0D9SFI3 127 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 MYADML2A6NDP7 307 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 DUSP11O75319 330 aaKnown RBP16.14■□□□□ 0.17
PRPF18-202ENST00000378572 SNAP25P60880 206 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 FPGSQ05932 587 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 STAG1Q8WVM7 1258 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 GMCL1Q96IK5 515 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 FAM227BQ96M60 508 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 AGBL1Q96MI9 1066 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 USP26Q9BXU7 913 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 C22orf23Q9BZE7 217 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 IL25Q9H293 177 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 MCM3APO60318 1980 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 NMT2O60551 498 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 RBM25P49756 843 aaKnown RBP16.14■□□□□ 0.17
PRPF18-202ENST00000378572 CNTN2Q02246 1040 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 FAM109BQ6ICB4 259 aaPredicted RBP16.14■□□□□ 0.17
PRPF18-202ENST00000378572 PCSK9Q8NBP7 692 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms