RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 GPR101Q96P66 508 aaPredicted RBP12.31□□□□□ -0.44
BEST1-201ENST00000378043 FUT8Q9BYC5 575 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 REXO2Q9Y3B8 237 aaKnown RBP12.31□□□□□ -0.44
BEST1-201ENST00000378043 TTC26A0AVF1 554 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 GNAQP50148 359 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 KCNB1Q14721 858 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 ANKZF1Q9H8Y5 726 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 ANKIB1Q9P2G1 1089 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 PUF60Q9UHX1 559 aaKnown RBP12.31□□□□□ -0.44
BEST1-201ENST00000378043 STX8Q9UNK0 236 aa12.31□□□□□ -0.44
BEST1-201ENST00000378043 FLT1P17948 1338 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 DDX60LQ5H9U9 1706 aaKnown RBP12.3□□□□□ -0.44
BEST1-201ENST00000378043 RHOBTB3O94955 611 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 GIMAP8Q8ND71 665 aaPredicted RBP12.3□□□□□ -0.44
BEST1-201ENST00000378043 SLF1Q9BQI6 1058 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
BEST1-201ENST00000378043 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 UBA7P41226 1012 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 NT5C2P49902 561 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 TRIM14Q14142 442 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 GALNT17Q6IS24 598 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 TTI2Q6NXR4 508 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 ZNF444Q8N0Y2 327 aaPredicted RBP12.3□□□□□ -0.44
BEST1-201ENST00000378043 MB21D1Q8N884 522 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 ANKRD20A12PQ8NF67 263 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 CCDC148Q8NFR7 591 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
BEST1-201ENST00000378043 ZMYND12Q9H0C1 365 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 ARFGAP3Q9NP61 516 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 SNED1Q8TER0 1413 aa12.3□□□□□ -0.44
BEST1-201ENST00000378043 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 KLRF2D3W0D1 207 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 PRPHP41219 470 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 WDR59Q6PJI9 974 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 CCDC151A5D8V7 595 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 EEF2KMTQ96G04 330 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 PNKPQ96T60 521 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 DUSP9Q99956 384 aaKnown RBP12.29□□□□□ -0.44
BEST1-201ENST00000378043 ZCCHC17Q9NP64 241 aaKnown RBP12.29□□□□□ -0.44
BEST1-201ENST00000378043 TRIM10Q9UDY6 481 aa12.29□□□□□ -0.44
BEST1-201ENST00000378043 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
BEST1-201ENST00000378043 EPN1Q9Y6I3 576 aaPredicted RBP12.29□□□□□ -0.44
BEST1-201ENST00000378043 LAD1O00515 517 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 NDUFA10O95299 355 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 BAG3O95817 575 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 MYL1P05976 194 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 PLCG1P19174 1290 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 EEF1GP26641 437 aaKnown RBP12.28□□□□□ -0.44
BEST1-201ENST00000378043 AMPD2Q01433 879 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 GRAPQ13588 217 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 TXNRD1Q16881 649 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 CCDC178Q5BJE1 867 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 GRAPLQ8TC17 118 aaPredicted RBP12.28□□□□□ -0.44
BEST1-201ENST00000378043 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 SPZ1Q9BXG8 430 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 A0A1W2PQC6 194 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 NKRFO15226 690 aaKnown RBP eCLIP12.28□□□□□ -0.44
BEST1-201ENST00000378043 FAM193AP78312 1265 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 LONRF2Q1L5Z9 754 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 CEP112Q8N8E3 955 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 OR8K1Q8NGG5 319 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 THAP9Q9H5L6 903 aa12.28□□□□□ -0.44
BEST1-201ENST00000378043 POLR3GO15318 223 aaPredicted RBP12.27□□□□□ -0.44
BEST1-201ENST00000378043 CDK8P49336 464 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 GSTO1P78417 241 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 USP17L2Q6R6M4 530 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 NAPGQ99747 312 aaPredicted RBP12.27□□□□□ -0.44
BEST1-201ENST00000378043 TRIM9Q9C026 710 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 MYO1AQ9UBC5 1043 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 CCNL1Q9UK58 526 aaPredicted RBP12.27□□□□□ -0.44
BEST1-201ENST00000378043 RAB21Q9UL25 225 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 CAPN11Q9UMQ6 739 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 TFR2Q9UP52 801 aa12.27□□□□□ -0.44
BEST1-201ENST00000378043 PSMA7O14818 248 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 CYP2C19P33261 490 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 STK4Q13043 487 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 TUBB2AQ13885 445 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 SMC1AQ14683 1233 aaKnown RBP12.27□□□□□ -0.45
BEST1-201ENST00000378043 BRD3Q15059 726 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 JAKMIP3Q5VZ66 844 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 CABP7Q86V35 215 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 TRIM47Q96LD4 638 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 EYA3Q99504 573 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.45
BEST1-201ENST00000378043 TUBB2BQ9BVA1 445 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 TTYH3Q9C0H2 523 aa12.27□□□□□ -0.45
BEST1-201ENST00000378043 LUC7L2Q9Y383 392 aaKnown RBP12.27□□□□□ -0.45
BEST1-201ENST00000378043 B4DLN1 442 aa12.26□□□□□ -0.45
BEST1-201ENST00000378043 MAP2K7O14733 419 aa12.26□□□□□ -0.45
BEST1-201ENST00000378043 CCNT1O60563 726 aaKnown RBP12.26□□□□□ -0.45
BEST1-201ENST00000378043 OR52Z1P0C646 297 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms