RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MORC3Q14149 939 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 KCNJ12Q14500 433 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 GPATCH4Q5T3I0 446 aaKnown RBP15.01□□□□□ -0.01
GPC6-201ENST00000377047 ADALQ6DHV7 355 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 HDXQ7Z353 690 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 ZNF577Q9BSK1 485 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 NUCKS1Q9H1E3 243 aaKnown RBP15.01□□□□□ -0.01
GPC6-201ENST00000377047 STAM2O75886 525 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 OATP04181 439 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 IVLP07476 585 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 TFDP1Q14186 410 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 COL4A3BPQ9Y5P4 624 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 HEG1Q9ULI3 1381 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 BTBD18B2RXH4 712 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 MYCP01106 439 aaPredicted RBP15.01□□□□□ -0.01
GPC6-201ENST00000377047 VIMP08670 466 aaKnown RBP15.01□□□□□ -0.01
GPC6-201ENST00000377047 ABCB4P21439 1286 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 RPS6KA1Q15418 735 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 SND1Q7KZF4 910 aaKnown RBP eCLIP15.01□□□□□ -0.015e-8■■■□□ 17.9
GPC6-201ENST00000377047 ABI1Q8IZP0 508 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 GPR101Q96P66 508 aaPredicted RBP15.01□□□□□ -0.01
GPC6-201ENST00000377047 ZSWIM6Q9HCJ5 1215 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 KIF1BO60333 1816 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 USP17L3A6NCW0 530 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 USP17L4A6NCW7 530 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 MMP10P09238 476 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 CIAPIN1Q6FI81 312 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 USP17L1Q7RTZ2 530 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 SPATA24Q86W54 205 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 FAM76AQ8TAV0 307 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 CCDC127Q96BQ5 260 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 MAGI3Q5TCQ9 1506 aa15.01□□□□□ -0.01
GPC6-201ENST00000377047 TUBBP07437 444 aa15□□□□□ -0.01
GPC6-201ENST00000377047 VPS52Q8N1B4 723 aa15□□□□□ -0.01
GPC6-201ENST00000377047 SLC39A2Q9NP94 309 aa15□□□□□ -0.01
GPC6-201ENST00000377047 ERVV-1B6SEH8 477 aa15□□□□□ -0.01
GPC6-201ENST00000377047 TRIM50Q86XT4 487 aa15□□□□□ -0.01
GPC6-201ENST00000377047 TTLL6Q8N841 843 aa15□□□□□ -0.01
GPC6-201ENST00000377047 POMGNT1Q8WZA1 660 aa15□□□□□ -0.01
GPC6-201ENST00000377047 GPR108Q9NPR9 543 aa15□□□□□ -0.01
GPC6-201ENST00000377047 LARSQ9P2J5 1176 aaKnown RBP15□□□□□ -0.01
GPC6-201ENST00000377047 PIK3CAP42336 1068 aa15□□□□□ -0.01
GPC6-201ENST00000377047 RSPH3Q86UC2 560 aa15□□□□□ -0.01
GPC6-201ENST00000377047 IFT20Q8IY31 132 aa15□□□□□ -0.01
GPC6-201ENST00000377047 IMPACTQ9P2X3 320 aa15□□□□□ -0.01
GPC6-201ENST00000377047 ARMCX3Q9UH62 379 aaPredicted RBP15□□□□□ -0.01
GPC6-201ENST00000377047 HECW2Q9P2P5 1572 aa15□□□□□ -0.01
GPC6-201ENST00000377047 N4BP1O75113 896 aaKnown RBP15□□□□□ -0.01
GPC6-201ENST00000377047 NBPF11Q86T75 865 aa15□□□□□ -0.01
GPC6-201ENST00000377047 RTKN2Q8IZC4 609 aa15□□□□□ -0.01
GPC6-201ENST00000377047 CCDC110Q8TBZ0 833 aa15□□□□□ -0.01
GPC6-201ENST00000377047 IFIH1Q9BYX4 1025 aaKnown RBP15□□□□□ -0.01
GPC6-201ENST00000377047 HESX1Q9UBX0 185 aa15□□□□□ -0.01
GPC6-201ENST00000377047 ADD3Q9UEY8 706 aaKnown RBP15□□□□□ -0.01
GPC6-201ENST00000377047 CSPG5O95196 566 aa15□□□□□ -0.01
GPC6-201ENST00000377047 IREB2P48200 963 aaKnown RBP15□□□□□ -0.01
GPC6-201ENST00000377047 GRAPQ13588 217 aa15□□□□□ -0.01
GPC6-201ENST00000377047 ZMYM1Q5SVZ6 1142 aa15□□□□□ -0.01
GPC6-201ENST00000377047 GRAPLQ8TC17 118 aaPredicted RBP15□□□□□ -0.01
GPC6-201ENST00000377047 ERVK-7P63135 1459 aa15□□□□□ -0.01
GPC6-201ENST00000377047 TLR3O15455 904 aaKnown RBP14.99□□□□□ -0.01
GPC6-201ENST00000377047 PTGDRQ13258 359 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 CLIC6Q96NY7 704 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 KIAA1024Q9UPX6 916 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 PDIA3P30101 505 aaKnown RBP14.99□□□□□ -0.01
GPC6-201ENST00000377047 CCND2P30279 289 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 USP28Q96RU2 1077 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 KANSL2Q9H9L4 492 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 SERPINB13Q9UIV8 391 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 C21orf2O43822 256 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 PDE6CP51160 858 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 STAT2P52630 851 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 ITKQ08881 620 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 GBP6Q6ZN66 633 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 INTS8Q75QN2 995 aaKnown RBP14.99□□□□□ -0.01
GPC6-201ENST00000377047 TIGD1Q96MW7 591 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 MIS18BP1Q6P0N0 1132 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 BRINP3Q76B58 766 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 PRKAG2Q9UGJ0 569 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 MAGI2Q86UL8 1455 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 BMP3P12645 472 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 LCORLQ8N3X6 602 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 RSAD2Q8WXG1 361 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 PGBD1Q96JS3 809 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 LRFN2Q9ULH4 789 aa14.99□□□□□ -0.01
GPC6-201ENST00000377047 SYMPKQ92797 1274 aaKnown RBP14.98□□□□□ -0.01
GPC6-201ENST00000377047 ANTXR1Q9H6X2 564 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 RAB20Q9NX57 234 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 PRKAB2O43741 272 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 ADD2P35612 726 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 TBC1D10BQ4KMP7 808 aaPredicted RBP14.98□□□□□ -0.01
GPC6-201ENST00000377047 FYB2Q5VWT5 728 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 SUSD4Q5VX71 490 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 RPN1P04843 607 aaKnown RBP14.98□□□□□ -0.01
GPC6-201ENST00000377047 LONRF2Q1L5Z9 754 aa14.98□□□□□ -0.01
GPC6-201ENST00000377047 HS1BP3Q53T59 392 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms