RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 DTHD1Q6ZMT9 781 aa12.02□□□□□ -0.49
ABCF1-202ENST00000376545 CUEDC2Q9H467 287 aa12.02□□□□□ -0.49
ABCF1-202ENST00000376545 MAGEF1Q9HAY2 307 aa12.02□□□□□ -0.49
ABCF1-202ENST00000376545 MCM9Q9NXL9 1143 aa12.02□□□□□ -0.49
ABCF1-202ENST00000376545 CAPN11Q9UMQ6 739 aa12.02□□□□□ -0.49
ABCF1-202ENST00000376545 BTAF1O14981 1849 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 COBLL1Q53SF7 1204 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 BEND6Q5SZJ8 279 aaPredicted RBP12.01□□□□□ -0.49
ABCF1-202ENST00000376545 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.497e-16■□□□□ 10.7
ABCF1-202ENST00000376545 NAPGQ99747 312 aaPredicted RBP12.01□□□□□ -0.49
ABCF1-202ENST00000376545 TTYH3Q9C0H2 523 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 KRT9P35527 623 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
ABCF1-202ENST00000376545 MEA1Q16626 185 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
ABCF1-202ENST00000376545 LZTS2Q9BRK4 669 aa12.01□□□□□ -0.49
ABCF1-202ENST00000376545 UBXN1Q04323 297 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 WDR59Q6PJI9 974 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 C15orf52Q6ZUT6 534 aaKnown RBP12□□□□□ -0.49
ABCF1-202ENST00000376545 NOC3LQ8WTT2 800 aaKnown RBP12□□□□□ -0.49
ABCF1-202ENST00000376545 AK8Q96MA6 479 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 EPN1Q9Y6I3 576 aaPredicted RBP12□□□□□ -0.49
ABCF1-202ENST00000376545 LY75O60449 1722 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 NHSQ6T4R5 1651 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 TTC26A0AVF1 554 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 TRIM49BA6NDI0 452 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 PSMD14O00487 310 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 NDUFA10O95299 355 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 NOVP48745 357 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 OR8K1Q8NGG5 319 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 DHTKD1Q96HY7 919 aaPredicted RBP12□□□□□ -0.49
ABCF1-202ENST00000376545 CHP1Q99653 195 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 SNED1Q8TER0 1413 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 SRGNP10124 158 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 PIP4K2BP78356 416 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 SH3RF3Q8TEJ3 882 aaPredicted RBP12□□□□□ -0.49
ABCF1-202ENST00000376545 DYNLL2Q96FJ2 89 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 PNKPQ96T60 521 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 SETDB2Q96T68 719 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 DUSP9Q99956 384 aaKnown RBP12□□□□□ -0.49
ABCF1-202ENST00000376545 L1RE1Q9UN81 338 aa12□□□□□ -0.49
ABCF1-202ENST00000376545 CCDC194A0A1B0GVG4 234 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 CCDC66A2RUB6 948 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 RASSF10A6NK89 507 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 PP2D1A8MPX8 630 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 SMARCA1P28370 1054 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 OAS2P29728 719 aaKnown RBP11.99□□□□□ -0.49
ABCF1-202ENST00000376545 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
ABCF1-202ENST00000376545 TUBBP07437 444 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 TRAPPC11Q7Z392 1133 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 C7orf25Q9BPX7 421 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 PSD3Q9NYI0 1048 aa11.99□□□□□ -0.49
ABCF1-202ENST00000376545 PUF60Q9UHX1 559 aaKnown RBP11.99□□□□□ -0.49
ABCF1-202ENST00000376545 A0A0G2JS52 829 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 USP17L3A6NCW0 530 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 USP17L4A6NCW7 530 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 RASA1P20936 1047 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 DNM2P50570 870 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 ORC2Q13416 577 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-202ENST00000376545 INF2Q27J81 1249 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 TPTE2Q6XPS3 522 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 USP17L1Q7RTZ2 530 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 NBPF5PQ86XG9 351 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-202ENST00000376545 SLF1Q9BQI6 1058 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 HAUS4Q9H6D7 363 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 MAPK8IP1Q9UQF2 711 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
ABCF1-202ENST00000376545 HERVK_113P62684 666 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 GSTO1P78417 241 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 FIGNQ5HY92 759 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 WDR93Q6P2C0 686 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 ZSCAN29Q8IWY8 852 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-202ENST00000376545 RETREG2Q8NC44 543 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 MYO6Q9UM54 1294 aa11.98□□□□□ -0.49
ABCF1-202ENST00000376545 PSMA7O14818 248 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 UBA7P41226 1012 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 CDK17Q00537 523 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 PAPD7Q5XG87 772 aaKnown RBP11.97□□□□□ -0.49
ABCF1-202ENST00000376545 DHX37Q8IY37 1157 aaKnown RBP11.97□□□□□ -0.49
ABCF1-202ENST00000376545 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
ABCF1-202ENST00000376545 LUC7L2Q9Y383 392 aaKnown RBP11.97□□□□□ -0.49
ABCF1-202ENST00000376545 TSPY3P0CV98 308 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 TSPY8P0CW00 308 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 CCNE1P24864 410 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 PPP1R2P41236 205 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 STIM1Q13586 685 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 SMIM5Q71RC9 77 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 CERS3Q8IU89 383 aa11.97□□□□□ -0.49
ABCF1-202ENST00000376545 NUP58Q9BVL2 599 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms