RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PI4KAP2A4QPH2 592 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 KRT9P35527 623 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 PI4KAP1Q8N8J0 262 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 TBC1D2BQ9UPU7 963 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 KDRP35968 1356 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 XIRP1Q702N8 1843 aaKnown RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 ANO9A1A5B4 782 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 DPPA5A6NC42 116 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 KIF4AO95239 1232 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 IMPDH2P12268 514 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 ZNF268Q14587 947 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 HHATQ5VTY9 493 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 WDR59Q6PJI9 974 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 ZNF662Q6ZS27 426 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 AIFM3Q96NN9 605 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 JADE2Q9NQC1 790 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 NLRP2Q9NX02 1062 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 ZFATQ9P243 1243 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 SERTAD1Q9UHV2 236 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 SLC12A4Q9UP95 1085 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 F8W031 263 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 CLTAP09496 248 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 TMOD1P28289 359 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 HPDP32754 393 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 CCT6AP40227 531 aaKnown RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 RANBP1P43487 201 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 CTCFP49711 727 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 MED1Q15648 1581 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 CFAP58Q5T655 872 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 TRIML1Q8N9V2 468 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 PURBQ96QR8 312 aaKnown RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 CTAGE1Q96RT6 745 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 TSC22D3Q99576 134 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 PEAK1Q9H792 1746 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 SMARCAL1Q9NZC9 954 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 NOP53Q9NZM5 478 aaKnown RBP10.62□□□□□ -0.71
SF3A3-201ENST00000373019 USP21Q9UK80 565 aa10.62□□□□□ -0.71
SF3A3-201ENST00000373019 LRRC10BA6NIK2 292 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 HMGB1P1B2RPK0 211 aaPredicted RBP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 ECEL1O95672 775 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 IDEP14735 1019 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 CARSP49589 748 aaKnown RBP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 MCMDC2Q4G0Z9 681 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 VPS37DQ86XT2 251 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 CACNA2D3Q8IZS8 1091 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 FBXL16Q8N461 479 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 FAM81AQ8TBF8 368 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 CCHCR1Q8TD31 782 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 P3H4Q92791 437 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 ZNF232Q9UNY5 417 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 KAT6BQ8WYB5 2073 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 UBN2Q6ZU65 1347 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 EIF4E1BA6NMX2 242 aaKnown RBP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 POLR2DO15514 142 aaKnown RBP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 TTC39AQ5SRH9 613 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 MREGQ8N565 214 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 ANKRD24Q8TF21 1146 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 ZFAND2BQ8WV99 257 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 FAM167BQ9BTA0 163 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 EHD2Q9NZN4 543 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 SNX12Q9UMY4 172 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 ZSCAN5CA6NGD5 496 aaPredicted RBP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 SH2B2O14492 632 aaPredicted RBP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 GLI1P08151 1106 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 MATR3P43243 847 aaKnown RBP eCLIP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 ZMYM1Q5SVZ6 1142 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 HDGFL1Q5TGJ6 251 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 IQCEQ6IPM2 695 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 CCDC70Q6NSX1 233 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 ARHGAP22Q7Z5H3 698 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 STK11IPQ8N1F8 1099 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 KAZALD1Q96I82 304 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
SF3A3-201ENST00000373019 PLEKHG4BQ96PX9 1271 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 BLOC1S6Q9UL45 172 aa10.61□□□□□ -0.71
SF3A3-201ENST00000373019 PALLDQ8WX93 1383 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 MYH13Q9UKX3 1938 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 TUBP50607 506 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 KRT31Q15323 416 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 CDC37Q16543 378 aaPredicted RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 PNMA8AQ86V59 439 aaPredicted RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 SPICE1Q8N0Z3 855 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 GORASP1Q9BQQ3 440 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 TMBIM4Q9HC24 238 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 BTG4Q9NY30 223 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 NFU1Q9UMS0 254 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 MAP3K15Q6ZN16 1313 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 SYNRGQ9UMZ2 1314 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 GPR75-ASB3A0A0A6YYF3 556 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 PHF20L1A8MW92 1017 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 CDKL5O76039 1030 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 NUGGCQ68CJ6 796 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 KLHL10Q6JEL2 608 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 RAPGEF5Q92565 580 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 ARHGEF10LQ9HCE6 1279 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 GDF3Q9NR23 364 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms