RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 GINS2Q9Y248 185 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 PPARAQ07869 468 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 PTGDRQ13258 359 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 NR5A1Q13285 461 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 NUF2Q9BZD4 464 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 FERMT1Q9BQL6 677 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 ARHGEF35A5YM69 484 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 SMAD1Q15797 465 aaKnown RBP12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 CYP4F22Q6NT55 531 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 ZDHHC9Q9Y397 364 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 NDC80O14777 642 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 LBHD1Q9BQE6 289 aaPredicted RBP12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 CFAP57Q96MR6 1250 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
PLXNA3-201ENST00000369682 HEXIM1O94992 359 aaKnown RBP12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 PDHA1P08559 390 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 DHX9Q08211 1270 aaKnown RBP12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 G3BP2Q9UN86 482 aaKnown RBP12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 DCUN1D2Q6PH85 259 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 MAGED2Q9UNF1 606 aaPredicted RBP12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 SH3BP5O60239 455 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 HIP1RO75146 1068 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 NFU1Q9UMS0 254 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 FAM135BQ49AJ0 1406 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 NCK2O43639 380 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 VCX3BQ9H321 246 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 CCDC197Q8NCU1 140 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 NUP58Q9BVL2 599 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 PHLPP2Q6ZVD8 1323 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 POC1B-GALNT4F8VUJ3 575 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 PDE6AP16499 860 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 ATP5JP18859 108 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 SERPINB6P35237 376 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 GBP7Q8N8V2 638 aaPredicted RBP12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 CLASP1Q7Z460 1538 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 MYO1CO00159 1063 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 GAS8O95995 478 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 FGAP02671 866 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 CLTCL1P53675 1640 aa12.69□□□□□ -0.38
PLXNA3-201ENST00000369682 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 TMED2Q15363 201 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 GYG1P46976 350 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 CFAP61Q8NHU2 1237 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 PPFIA4O75335 1185 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 KRT19P08727 400 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 LIN9Q5TKA1 542 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 CNOT6LQ96LI5 555 aaKnown RBP12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 ERFP50548 548 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 CASP8Q14790 479 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 ZNF449Q6P9G9 518 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 REXO1Q8N1G1 1221 aaKnown RBP12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 ZNF496Q96IT1 587 aaPredicted RBP12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 GRM1Q13255 1194 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 LRRC47Q8N1G4 583 aaKnown RBP12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 SMCO2A6NFE2 343 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 STX10O60499 249 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 RAB3IPQ96QF0 476 aaPredicted RBP12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 WDR24Q96S15 920 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 CASQ2O14958 399 aaPredicted RBP12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 KDRP35968 1356 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 MLXIPQ9HAP2 919 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 GGCXP38435 758 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 RTEL1Q9NZ71 1219 aa12.68□□□□□ -0.38
PLXNA3-201ENST00000369682 IQGAP3Q86VI3 1631 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 FNBP1Q96RU3 617 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 KLHL14Q9P2G3 628 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 SSX2IPQ9Y2D8 614 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 SPATA1Q5VX52 437 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 POLE2P56282 527 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 NONOQ15233 471 aaKnown RBP eCLIP12.67□□□□□ -0.382e-7■□□□□ 8.6
PLXNA3-201ENST00000369682 VSTM4Q8IW00 320 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 SMCR8Q8TEV9 937 aaPredicted RBP12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 PANK4Q9NVE7 773 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 HP1BP3Q5SSJ5 553 aaPredicted RBP12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 DNAI2Q9GZS0 605 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 PLAAQ9Y263 795 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 SLC4A7Q9Y6M7 1214 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 CYP4A11Q02928 519 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 IP6K1Q92551 441 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 GJA10Q969M2 543 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 C8orf37Q96NL8 207 aa12.67□□□□□ -0.38
PLXNA3-201ENST00000369682 PLEKHF1Q96S99 279 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms