RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 MRPS23Q9Y3D9 190 aaKnown RBP7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 GLI2P10070 1586 aa7.96□□□□□ -1.14
RNU4-39P-201ENST00000362455 KDM5BQ9UGL1 1544 aa7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 PRR33A8MZF0 331 aa7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 PRODHO43272 600 aa7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 SIGLEC6O43699 453 aa7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 KCNH1O95259 989 aa7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 FGFR1P11362 822 aa7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 PABPC1P11940 636 aaKnown RBP7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 CBX2Q14781 532 aaPredicted RBP7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 DALRD3Q5D0E6 543 aaKnown RBP7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 SCUBE1Q8IWY4 988 aa7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 DIS3Q9Y2L1 958 aaKnown RBP7.95□□□□□ -1.14
RNU4-39P-201ENST00000362455 FAM170BA6NMN3 283 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 IGF2BP3O00425 579 aaKnown RBP eCLIP7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 PRAMEF1O95521 474 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 ZNF865P0CJ78 1059 aaPredicted RBP7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 NMIQ13287 307 aaPredicted RBP7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 CYP27C1Q4G0S4 372 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 GTF2IRD2BQ6EKJ0 949 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 NSMFQ6X4W1 530 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 PRR23CQ6ZRP0 262 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 C22orf34Q6ZV56 151 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 ZNF765Q7L2R6 523 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 GTF2IRD2Q86UP8 949 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 OSBP2Q969R2 916 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 MFSD14AQ96MC6 490 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 ZDHHC15Q96MV8 337 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 DSCC1Q9BVC3 393 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 NCOA5Q9HCD5 579 aaKnown RBP7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 CHST7Q9NS84 486 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 MINPP1Q9UNW1 487 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 PLAAQ9Y263 795 aa7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 PPRC1Q5VV67 1664 aaKnown RBP7.94□□□□□ -1.14
RNU4-39P-201ENST00000362455 MEIS1O00470 390 aa7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 ITGB2P05107 769 aa7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 MASP1P48740 699 aa7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 TNK2Q07912 1038 aa7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 GRB10Q13322 594 aa7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 MFSD4AQ8N468 514 aa7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 ASCC2Q9H1I8 757 aaPredicted RBP7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 SF3B6Q9Y3B4 125 aaKnown RBP7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 CAPN6Q9Y6Q1 641 aa7.93□□□□□ -1.14
RNU4-39P-201ENST00000362455 SHISA3A0PJX4 238 aa7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 PLD2O14939 933 aa7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 RAPGEF3O95398 923 aa7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 SUMO1P63165 101 aaKnown RBP7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 PABPC4Q13310 644 aaKnown RBP eCLIP7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 SF1Q15637 639 aaKnown RBP7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 ZCRB1Q8TBF4 217 aaKnown RBP7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 PIWIL2Q8TC59 973 aaKnown RBP7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 NINJ1Q92982 152 aa7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 TMX1Q9H3N1 280 aa7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 COL4A3BPQ9Y5P4 624 aa7.92□□□□□ -1.14
RNU4-39P-201ENST00000362455 GNAT3A8MTJ3 354 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 H0Y8X5 98 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 DLX3O60479 287 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 VAMP4O75379 141 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 RFPL3O75679 317 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 F13BP05160 661 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 CYP27A1Q02318 531 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 RNF43Q68DV7 783 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 DHX37Q8IY37 1157 aaKnown RBP7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 NIM1KQ8IY84 436 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 HDAC8Q9BY41 377 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 NKX2-4Q9H2Z4 354 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 GPR55Q9Y2T6 319 aaPredicted RBP7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 UGGT2Q9NYU1 1516 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 CUL7Q14999 1698 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 TSPOAP1O95153 1857 aa7.91□□□□□ -1.14
RNU4-39P-201ENST00000362455 IQGAP2Q13576 1575 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 DNAJC25-GNG10A0A024R161 153 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 hCG_2014768A0A024R1R8 64 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 MSTNO14793 375 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 IGHA1P01876 353 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 SNRPB2P08579 225 aaKnown RBP7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 IBSPP21815 317 aaPredicted RBP7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 CTSKP43235 329 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 GFRA1P56159 465 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 AMPD2Q01433 879 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 CLEC16AQ2KHT3 1053 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 DPY19L1Q2PZI1 675 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 FNDC3BQ53EP0 1204 aaKnown RBP7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 DUSP27Q5VZP5 1158 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 MFSD3Q96ES6 412 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 CLUHP3Q96NS8 147 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 MRPL4Q9BYD3 311 aaKnown RBP7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 BRINP2Q9C0B6 783 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 TPSG1Q9NRR2 321 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 U3KQE9 123 aa7.9□□□□□ -1.14
RNU4-39P-201ENST00000362455 RAPGEF2Q9Y4G8 1499 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 FAM155AB1AL88 458 aaPredicted RBP7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 ITIH2P19823 946 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 HOXC12P31275 282 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 KCNJ6P48051 423 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 NFIAQ12857 509 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms