RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NFE2L3Q9Y4A8 694 aa20.72■□□□□ 0.91
PDLIM7-203ENST00000359895 ZBTB7AO95365 584 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 MYL1P05976 194 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 ZNF18P17022 549 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 STAT6P42226 847 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 ADCY7P51828 1080 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 EIF6P56537 245 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 CCZ1BP86790 482 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 CCZ1P86791 482 aaPredicted RBP20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 FMR1Q06787 632 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 SEMA3FQ13275 785 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 TMEM60Q9H2L4 133 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 GPCPD1Q9NPB8 672 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 DISC1Q9NRI5 854 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 NYAP2Q9P242 653 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 FAM198AQ9UFP1 575 aa20.71■□□□□ 0.91
PDLIM7-203ENST00000359895 OR52Z1P0C646 297 aa20.7■□□□□ 0.9
PDLIM7-203ENST00000359895 CDK11BP21127 795 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-203ENST00000359895 MKL1Q969V6 931 aa20.7■□□□□ 0.9
PDLIM7-203ENST00000359895 KANSL2Q9H9L4 492 aa20.7■□□□□ 0.9
PDLIM7-203ENST00000359895 KCND1Q9NSA2 647 aa20.7■□□□□ 0.9
PDLIM7-203ENST00000359895 ENTPD3O75355 529 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 SFPQP23246 707 aaKnown RBP eCLIP20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 UBA7P41226 1012 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 ARID5BQ14865 1188 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 CCDC96Q2M329 555 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 CERKLQ49MI3 558 aaPredicted RBP20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 SPATA1Q5VX52 437 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 VSTM4Q8IW00 320 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 ZFPM1Q8IX07 1006 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 CUEDC2Q9H467 287 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 JMJD4Q9H9V9 463 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 MAGEF1Q9HAY2 307 aa20.69■□□□□ 0.9
PDLIM7-203ENST00000359895 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 CCNT1O60563 726 aaKnown RBP20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 KCNJ6P48051 423 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 TCP10Q12799 353 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 CUL4BQ13620 913 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 LETM2Q2VYF4 491 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 RRAGBQ5VZM2 374 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 TATDN1Q6P1N9 297 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 CLEC10AQ8IUN9 316 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 ZSCAN29Q8IWY8 852 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 ADGRF4Q8IZF3 695 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 DCAF4Q8WV16 495 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 DNAJC18Q9H819 358 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 SYNRGQ9UMZ2 1314 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 DDTLA6NHG4 134 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 ATP2B2Q01814 1243 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 RTKN2Q8IZC4 609 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 RASSF8Q8NHQ8 419 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 TBCKQ8TEA7 893 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 DPF2Q92785 391 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 MTMR8Q96EF0 704 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 GLT8D2Q9H1C3 349 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 RIC8AQ9NPQ8 531 aa20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 BIN2Q9UBW5 565 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-203ENST00000359895 ATRNL1Q5VV63 1379 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 CACNB3P54284 484 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 KARSQ15046 597 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 TPD52L1Q16890 204 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 JAKMIP3Q5VZ66 844 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 TMEM179Q6ZVK1 233 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 TRMT44Q8IYL2 757 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 CCDC112Q8NEF3 446 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 COA7Q96BR5 231 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 PCDHAC2Q9Y5I4 1007 aa20.67■□□□□ 0.9
PDLIM7-203ENST00000359895 UQCRHLA0A096LP55 91 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 PPP1R3GB7ZBB8 358 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 ZBTB5O15062 677 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 UQCRHP07919 91 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 CASP1P29466 404 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 ZNF658Q5TYW1 1059 aaPredicted RBP20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 ARMCX5Q6P1M9 558 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 MYRIPQ8NFW9 859 aa20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 ATF5Q9Y2D1 282 aaPredicted RBP20.66■□□□□ 0.9
PDLIM7-203ENST00000359895 KIF13BQ9NQT8 1826 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 C21orf2O43822 256 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 RPN1P04843 607 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 CD44P16070 742 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 MRPL12P52815 198 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 SH3BP5LQ7L8J4 393 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 STAMQ92783 540 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 MED15Q96RN5 788 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 PSMD1Q99460 953 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 MTRQ99707 1265 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 BLZF1Q9H2G9 400 aa20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-203ENST00000359895 MYH7BA7E2Y1 1941 aa20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 EEF2P13639 858 aaKnown RBP20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 TTBK2Q6IQ55 1244 aa20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 CABP7Q86V35 215 aa20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 CUL5Q93034 780 aa20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 CTAGE1Q96RT6 745 aa20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 VPS33BQ9H267 617 aa20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 TMOD2Q9NZR1 351 aa20.64■□□□□ 0.9
PDLIM7-203ENST00000359895 YDJCA8MPS7 323 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 CDC25AP30304 524 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms