RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CCDC51Q96ER9 411 aa17.55■□□□□ 0.4
COL18A1-203ENST00000359759 PNMA6EA0A0J9YXQ4 647 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 GARSP41250 739 aaKnown RBP17.54■□□□□ 0.4
COL18A1-203ENST00000359759 REXO1Q8N1G1 1221 aaKnown RBP17.54■□□□□ 0.4
COL18A1-203ENST00000359759 FANCLQ9NW38 375 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 MUM1L1Q5H9M0 696 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 PSPC1Q8WXF1 523 aaKnown RBP17.54■□□□□ 0.4
COL18A1-203ENST00000359759 ATICP31939 592 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 ASPHQ12797 758 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 RFX6Q8HWS3 928 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 EYA1Q99502 592 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 METTL22Q9BUU2 404 aaPredicted RBP17.54■□□□□ 0.4
COL18A1-203ENST00000359759 YWHAEP62258 255 aaKnown RBP17.54■□□□□ 0.4
COL18A1-203ENST00000359759 GLG1Q92896 1179 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.47e-7■■■□□ 16.3
COL18A1-203ENST00000359759 SLC4A1P02730 911 aa17.54■□□□□ 0.4
COL18A1-203ENST00000359759 INTS9Q9NV88 658 aaKnown RBP17.54■□□□□ 0.4
COL18A1-203ENST00000359759 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.54■□□□□ 0.4
COL18A1-203ENST00000359759 PPM1KQ8N3J5 372 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 PPP1R13BQ96KQ4 1090 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 TMED2Q15363 201 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 ANKRD20A4Q4UJ75 823 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 ANKRD20A8PQ5CZ79 823 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 ANKRD20A2Q5SQ80 823 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 ANKRD20A1Q5TYW2 823 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 OTUD6AQ7L8S5 288 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 CCDC197Q8NCU1 140 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 GDAP1Q8TB36 358 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 PDCD2Q16342 344 aaPredicted RBP17.53■□□□□ 0.4
COL18A1-203ENST00000359759 PLBD2Q8NHP8 589 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 EDC3Q96F86 508 aaKnown RBP17.53■□□□□ 0.4
COL18A1-203ENST00000359759 RRP15Q9Y3B9 282 aaKnown RBP17.53■□□□□ 0.4
COL18A1-203ENST00000359759 POLD1P28340 1107 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 PIK3CAP42336 1068 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 POLE2P56282 527 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 GLT8D2Q9H1C3 349 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 MESDQ14696 234 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 LLGL1Q15334 1064 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 TBC1D10BQ4KMP7 808 aaPredicted RBP17.53■□□□□ 0.4
COL18A1-203ENST00000359759 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 SPATS2Q86XZ4 545 aaKnown RBP17.53■□□□□ 0.4
COL18A1-203ENST00000359759 CCDC68Q9H2F9 335 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 PYCARDQ9ULZ3 195 aa17.53■□□□□ 0.4
COL18A1-203ENST00000359759 PDE8AO60658 829 aa17.52■□□□□ 0.4
COL18A1-203ENST00000359759 SUN1O94901 812 aa17.52■□□□□ 0.4
COL18A1-203ENST00000359759 MYLK4Q86YV6 388 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-203ENST00000359759 GPKOWQ92917 476 aaPredicted RBP eCLIP17.52■□□□□ 0.43e-6■■■■□ 20.9
COL18A1-203ENST00000359759 INHBAP08476 426 aa17.52■□□□□ 0.4
COL18A1-203ENST00000359759 RSBN1LQ6PCB5 846 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-203ENST00000359759 C1orf112Q9NSG2 853 aa17.52■□□□□ 0.4
COL18A1-203ENST00000359759 THRAP3Q9Y2W1 955 aaKnown RBP17.52■□□□□ 0.4
COL18A1-203ENST00000359759 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.4
COL18A1-203ENST00000359759 HAUS1Q96CS2 278 aa17.52■□□□□ 0.4
COL18A1-203ENST00000359759 ADALQ6DHV7 355 aa17.52■□□□□ 0.39
COL18A1-203ENST00000359759 KRT82Q9NSB4 513 aa17.52■□□□□ 0.39
COL18A1-203ENST00000359759 ABCF3Q9NUQ8 709 aa17.52■□□□□ 0.39
COL18A1-203ENST00000359759 G3BP2Q9UN86 482 aaKnown RBP17.52■□□□□ 0.39
COL18A1-203ENST00000359759 CLIC4Q9Y696 253 aa17.52■□□□□ 0.39
COL18A1-203ENST00000359759 GPC4O75487 556 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 TNNC2P02585 160 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 S100BP04271 92 aaPredicted RBP17.51■□□□□ 0.39
COL18A1-203ENST00000359759 IL9RQ01113 521 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 PPARAQ07869 468 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 RINT1Q6NUQ1 792 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 TMTC3Q6ZXV5 915 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 CADPS2Q86UW7 1296 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 CCDC127Q96BQ5 260 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 NT5C3AQ9H0P0 336 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 LARSQ9P2J5 1176 aaKnown RBP17.51■□□□□ 0.39
COL18A1-203ENST00000359759 NRBP1Q9UHY1 535 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 NLRX1Q86UT6 975 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 RPN1P04843 607 aaKnown RBP17.51■□□□□ 0.39
COL18A1-203ENST00000359759 NDUFA8P51970 172 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL18A1-203ENST00000359759 KBTBD3Q8NAB2 608 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 GSTA4O15217 222 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 TBK1Q9UHD2 729 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 EEF1B2P24534 225 aaKnown RBP17.51■□□□□ 0.39
COL18A1-203ENST00000359759 EP400NLQ6ZTU2 488 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 SLC35F6Q8N357 371 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 FLT4P35916 1363 aa17.51■□□□□ 0.39
COL18A1-203ENST00000359759 ABCC1P33527 1531 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 KIF11P52732 1056 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 PDE1BQ01064 536 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 XKR9Q5GH70 373 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 ZBTB41Q5SVQ8 909 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 SPATS2LQ9NUQ6 558 aaKnown RBP17.5■□□□□ 0.39
COL18A1-203ENST00000359759 ANGPTL3Q9Y5C1 460 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 WDR91A4D1P6 747 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 CXCR5P32302 372 aa17.5■□□□□ 0.39
COL18A1-203ENST00000359759 FAM47CQ5HY64 1035 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms