RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 K7ENM7 598 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 RSBN1LQ6PCB5 846 aaPredicted RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 FMNL3Q8IVF7 1028 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 GOLGA6L10A0A0M3HER8 536 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 GOLGA6L9A6NEM1 432 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 CYP2E1P05181 493 aaPredicted RBP10.8□□□□□ -0.68
GABPA-201ENST00000354828 KIAA1841Q6NSI8 718 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 PARP2Q9UGN5 583 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 MROH2AA6NES4 1674 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 CYP21A2P08686 494 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 HOXA13P31271 388 aaPredicted RBP10.8□□□□□ -0.68
GABPA-201ENST00000354828 TGFB2P61812 414 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 IFFO1Q0D2I5 559 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 TBC1D8BQ0IIM8 1120 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 MED10Q9BTT4 135 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 ANKFY1Q9P2R3 1169 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 ATF7P17544 494 aaPredicted RBP10.8□□□□□ -0.68
GABPA-201ENST00000354828 CYP2J2P51589 502 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 HMGCS2P54868 508 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 SAMD7Q7Z3H4 446 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 FAM178BQ8IXR5 827 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 MMS19Q96T76 1030 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 KCNH4Q9UQ05 1017 aa10.8□□□□□ -0.68
GABPA-201ENST00000354828 TNNC2P02585 160 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 GYS1P13807 737 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 RASGRP4Q8TDF6 673 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 MICAL1Q8TDZ2 1067 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 LMBR1Q8WVP7 490 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 MAP4K1Q92918 833 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 STRBPQ96SI9 672 aaKnown RBP10.79□□□□□ -0.68
GABPA-201ENST00000354828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.79□□□□□ -0.68
GABPA-201ENST00000354828 DAPK3O43293 454 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 PFKFB2O60825 505 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 TNFAIP3P21580 790 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 ZSCAN23Q3MJ62 389 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 APOA5Q6Q788 366 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 MAK16Q9BXY0 300 aaKnown RBP10.79□□□□□ -0.68
GABPA-201ENST00000354828 BLZF1Q9H2G9 400 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 RABGAP1Q9Y3P9 1069 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 PPLO60437 1756 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 TYRO3Q06418 890 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 ZNF771Q7L3S4 317 aaPredicted RBP10.79□□□□□ -0.68
GABPA-201ENST00000354828 TSNARE1Q96NA8 513 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 PPP1R16BQ96T49 567 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 FAM49AQ9H0Q0 323 aaPredicted RBP10.79□□□□□ -0.68
GABPA-201ENST00000354828 ZFYVE28Q9HCC9 887 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 FEM1BQ9UK73 627 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 LUC7L2Q9Y383 392 aaKnown RBP10.79□□□□□ -0.68
GABPA-201ENST00000354828 ZBBXA8MT70 800 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 FCER1AP12319 257 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 PDIA3P30101 505 aaKnown RBP10.79□□□□□ -0.68
GABPA-201ENST00000354828 PPP2R5AQ15172 486 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 TMED8Q6PL24 325 aaPredicted RBP10.79□□□□□ -0.68
GABPA-201ENST00000354828 GSTA5Q7RTV2 222 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 SLC44A5Q8NCS7 719 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.79□□□□□ -0.68
GABPA-201ENST00000354828 ZSWIM5Q9P217 1185 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 SUGT1Q9Y2Z0 365 aa10.79□□□□□ -0.68
GABPA-201ENST00000354828 UTYO14607 1347 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 MARK3P27448 753 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 IFRD2Q12894 506 aaPredicted RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 KMT5BQ4FZB7 885 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 CEP170P1Q96L14 293 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 HERC5Q9UII4 1024 aaKnown RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 RIPOR2Q9Y4F9 1068 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 SNAPC2Q13487 334 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 MMP19Q99542 508 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 SCAF8Q9UPN6 1271 aaKnown RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 CD2APQ9Y5K6 639 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 NRKQ7Z2Y5 1582 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 EIF3JO75822 258 aaKnown RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 RPS12P25398 132 aaKnown RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 ECE1P42892 770 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 TTC14Q96N46 770 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 CRACR2AQ9BSW2 395 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 RNF146Q9NTX7 359 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 TMEM191BP0C7N4 346 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 PAK1Q13153 545 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 STXBP2Q15833 593 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 EXOC8Q8IYI6 725 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 DYDC1Q8WWB3 177 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 RIOK1Q9BRS2 568 aaKnown RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 MXD3Q9BW11 206 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 RNF26Q9BY78 433 aaPredicted RBP10.78□□□□□ -0.68
GABPA-201ENST00000354828 ZMYND15Q9H091 742 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 VPS16Q9H269 839 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 MYOZ2Q9NPC6 264 aa10.78□□□□□ -0.68
GABPA-201ENST00000354828 PCDHA4Q9UN74 947 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms