RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TSEN34Q9BSV6 310 aaKnown RBP18.87■□□□□ 0.61
PDGFA-201ENST00000354513 NACAP1Q9BZK3 213 aa18.87■□□□□ 0.61
PDGFA-201ENST00000354513 TMEM232C9JQI7 657 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 CST5P28325 142 aaPredicted RBP18.86■□□□□ 0.61
PDGFA-201ENST00000354513 NOVP48745 357 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 CNTN2Q02246 1040 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 FAAP100Q0VG06 881 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 ACVR2BQ13705 512 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 LRRFIP1Q32MZ4 808 aaKnown RBP18.86■□□□□ 0.61
PDGFA-201ENST00000354513 FAM133AQ8N9E0 248 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 CHST13Q8NET6 341 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 CHMP4CQ96CF2 233 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 GMCL1Q96IK5 515 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 FAM161BQ96MY7 647 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
PDGFA-201ENST00000354513 FAM184BQ9ULE4 1060 aa18.86■□□□□ 0.61
PDGFA-201ENST00000354513 DLL1O00548 723 aa18.85■□□□□ 0.61
PDGFA-201ENST00000354513 PQBP1O60828 265 aaKnown RBP18.85■□□□□ 0.61
PDGFA-201ENST00000354513 DUSP11O75319 330 aaKnown RBP18.85■□□□□ 0.61
PDGFA-201ENST00000354513 ARMCX2Q7L311 632 aa18.85■□□□□ 0.61
PDGFA-201ENST00000354513 ANKRD33Q7Z3H0 272 aa18.85■□□□□ 0.61
PDGFA-201ENST00000354513 AGBL1Q96MI9 1066 aa18.85■□□□□ 0.61
PDGFA-201ENST00000354513 A1CFQ9NQ94 594 aaKnown RBP18.85■□□□□ 0.61
PDGFA-201ENST00000354513 HOMER2Q9NSB8 354 aa18.85■□□□□ 0.61
PDGFA-201ENST00000354513 ANAPC4Q9UJX5 808 aa18.85■□□□□ 0.61
PDGFA-201ENST00000354513 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
PDGFA-201ENST00000354513 SOWAHBA6NEL2 793 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 STAT2P52630 851 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 SNAP25P60880 206 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 KCNA10Q16322 511 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 CCDC144BQ3MJ40 725 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 KCTD1Q719H9 257 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 CCDC144CPQ8IYA2 1237 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 ANKRD35Q8N283 1001 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 TTYH1Q9H313 450 aaPredicted RBP18.84■□□□□ 0.61
PDGFA-201ENST00000354513 FBXO40Q9UH90 709 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 PRUNE2Q8WUY3 3088 aa18.84■□□□□ 0.61
PDGFA-201ENST00000354513 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.83■□□□□ 0.61
PDGFA-201ENST00000354513 MOXD2PA6NHM9 499 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 PLA2G6O60733 806 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 FGRP09769 529 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 PTGS1P23219 599 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 MCCP23508 829 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 GJA9P57773 515 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 FAM160B2Q86V87 743 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 STAG1Q8WVM7 1258 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 ABHD16BQ9H3Z7 469 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 ACAD9Q9H845 621 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 STARD7Q9NQZ5 370 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 RNF146Q9NTX7 359 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 TBX21Q9UL17 535 aa18.83■□□□□ 0.61
PDGFA-201ENST00000354513 A0A0D9SFI3 127 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 SLC3A2P08195 630 aaKnown RBP18.82■□□□□ 0.6
PDGFA-201ENST00000354513 FDX1P10109 184 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 CDK7P50613 346 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 PDE1AP54750 535 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 NKX3-2P78367 333 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 ZNF697Q5TEC3 545 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 FAM227BQ96M60 508 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 TOX2Q96NM4 488 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 PRR12Q9ULL5 1215 aa18.82■□□□□ 0.6
PDGFA-201ENST00000354513 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
PDGFA-201ENST00000354513 MYH6P13533 1939 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 TSPY2A6NKD2 308 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 ORC4O43929 436 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 ASGR1P07306 291 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 SLC1A4P43007 532 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 SMAD3P84022 425 aaKnown RBP18.81■□□□□ 0.6
PDGFA-201ENST00000354513 ALX1Q15699 326 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 EVI5LQ96CN4 794 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 STX8Q9UNK0 236 aa18.81■□□□□ 0.6
PDGFA-201ENST00000354513 C6orf222P0C671 652 aaPredicted RBP18.8■□□□□ 0.6
PDGFA-201ENST00000354513 RAG1P15918 1043 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 TMEM63BQ5T3F8 832 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 RCSD1Q6JBY9 416 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 ZNF589Q86UQ0 364 aaPredicted RBP18.8■□□□□ 0.6
PDGFA-201ENST00000354513 CHURC1Q8WUH1 139 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 NUP133Q8WUM0 1156 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 PURBQ96QR8 312 aaKnown RBP18.8■□□□□ 0.6
PDGFA-201ENST00000354513 CDX2Q99626 313 aaPredicted RBP18.8■□□□□ 0.6
PDGFA-201ENST00000354513 SEMA6BQ9H3T3 888 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 TMEM39AQ9NV64 488 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 CHD9Q3L8U1 2897 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 ELP1O95163 1332 aa18.8■□□□□ 0.6
PDGFA-201ENST00000354513 SPTBN5Q9NRC6 3674 aaKnown RBP18.8■□□□□ 0.6
PDGFA-201ENST00000354513 ALAS1P13196 640 aa18.79■□□□□ 0.6
PDGFA-201ENST00000354513 FPGSQ05932 587 aa18.79■□□□□ 0.6
PDGFA-201ENST00000354513 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
PDGFA-201ENST00000354513 TTBK2Q6IQ55 1244 aa18.79■□□□□ 0.6
PDGFA-201ENST00000354513 CCDC174Q6PII3 467 aa18.79■□□□□ 0.6
PDGFA-201ENST00000354513 TRERF1Q96PN7 1200 aa18.79■□□□□ 0.6
PDGFA-201ENST00000354513 HELLSQ9NRZ9 838 aa18.79■□□□□ 0.6
PDGFA-201ENST00000354513 ISY1Q9ULR0 285 aaKnown RBP18.79■□□□□ 0.6
PDGFA-201ENST00000354513 GNEQ9Y223 722 aaKnown RBP18.79■□□□□ 0.6
PDGFA-201ENST00000354513 TANC1Q9C0D5 1861 aa18.79■□□□□ 0.6
PDGFA-201ENST00000354513 BEX3Q00994 111 aa18.78■□□□□ 0.6
PDGFA-201ENST00000354513 TKFCQ3LXA3 575 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms