RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 CSRNP2Q9H175 543 aa18.03■□□□□ 0.48
MBD1-204ENST00000347968 MAST3O60307 1309 aa18.03■□□□□ 0.48
MBD1-204ENST00000347968 KRT86O43790 486 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 SMNDC1O75940 238 aaKnown RBP eCLIP18.02■□□□□ 0.48
MBD1-204ENST00000347968 IPO7O95373 1038 aaKnown RBP18.02■□□□□ 0.48
MBD1-204ENST00000347968 RANBP1P43487 201 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 ITGB3BPQ13352 177 aaPredicted RBP18.02■□□□□ 0.48
MBD1-204ENST00000347968 CACNA2D3Q8IZS8 1091 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 PIDD1Q9HB75 910 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 LRWD1Q9UFC0 647 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 LAMA4Q16363 1823 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 A8MUI8 341 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 ERCC5P28715 1186 aaPredicted RBP18.02■□□□□ 0.48
MBD1-204ENST00000347968 TOB1P50616 345 aaPredicted RBP18.02■□□□□ 0.48
MBD1-204ENST00000347968 TIMM10P62072 90 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 NR5A1Q13285 461 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 CCDC96Q2M329 555 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 RPGRIP1Q96KN7 1286 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 PLAAQ9Y263 795 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 USP54Q70EL1 1684 aa18.02■□□□□ 0.48
MBD1-204ENST00000347968 DCDC2CA8MYV0 355 aa18.02■□□□□ 0.47
MBD1-204ENST00000347968 HGSO14964 777 aaPredicted RBP18.02■□□□□ 0.47
MBD1-204ENST00000347968 PLEKP08567 350 aaPredicted RBP18.02■□□□□ 0.47
MBD1-204ENST00000347968 IQCKQ8N0W5 287 aa18.02■□□□□ 0.47
MBD1-204ENST00000347968 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.47
MBD1-204ENST00000347968 LMTK3Q96Q04 1460 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 LINGO3P0C6S8 592 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 VAV2P52735 878 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 ICA1Q05084 483 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 TRAF1Q13077 416 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 EMBQ6PCB8 327 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 NFXL1Q6ZNB6 911 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 CTAGE1Q96RT6 745 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 PAGR1Q9BTK6 254 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 DBF4Q9UBU7 674 aaPredicted RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 LUC7L2Q9Y383 392 aaKnown RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 PPP1R3GB7ZBB8 358 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 XRCC4Q13426 336 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 WASHC4Q2M389 1173 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 RRAGBQ5VZM2 374 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 MDM1Q8TC05 714 aa18.01■□□□□ 0.47
MBD1-204ENST00000347968 CNOT8Q9UFF9 292 aaKnown RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 FBXO2Q9UK22 296 aaPredicted RBP18.01■□□□□ 0.47
MBD1-204ENST00000347968 GNAT1P11488 350 aa18■□□□□ 0.47
MBD1-204ENST00000347968 GUCY1A2P33402 732 aa18■□□□□ 0.47
MBD1-204ENST00000347968 SLC26A6Q9BXS9 759 aa18■□□□□ 0.47
MBD1-204ENST00000347968 ARHGEF10LQ9HCE6 1279 aa18■□□□□ 0.47
MBD1-204ENST00000347968 SNX12Q9UMY4 172 aa18■□□□□ 0.47
MBD1-204ENST00000347968 PXDNQ92626 1479 aa18■□□□□ 0.47
MBD1-204ENST00000347968 FAM237AA0A1B0GTK4 181 aa18■□□□□ 0.47
MBD1-204ENST00000347968 TRIM49BA6NDI0 452 aa18■□□□□ 0.47
MBD1-204ENST00000347968 HEXIM1O94992 359 aaKnown RBP18■□□□□ 0.47
MBD1-204ENST00000347968 FECHP22830 423 aa18■□□□□ 0.47
MBD1-204ENST00000347968 METAP2P50579 478 aaKnown RBP eCLIP18■□□□□ 0.47
MBD1-204ENST00000347968 MAP3K12Q12852 859 aa18■□□□□ 0.47
MBD1-204ENST00000347968 TRIM29Q14134 588 aa18■□□□□ 0.47
MBD1-204ENST00000347968 HLFQ16534 295 aa18■□□□□ 0.47
MBD1-204ENST00000347968 RALYLQ86SE5 291 aaKnown RBP18■□□□□ 0.47
MBD1-204ENST00000347968 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
MBD1-204ENST00000347968 NCAPD2Q15021 1401 aa18■□□□□ 0.47
MBD1-204ENST00000347968 FAM205CA6NFA0 338 aa18■□□□□ 0.47
MBD1-204ENST00000347968 KCNJ18B7U540 433 aa18■□□□□ 0.47
MBD1-204ENST00000347968 KCNJ12Q14500 433 aa18■□□□□ 0.47
MBD1-204ENST00000347968 TSR1Q2NL82 804 aaKnown RBP18■□□□□ 0.47
MBD1-204ENST00000347968 NT5DC1Q5TFE4 455 aa18■□□□□ 0.47
MBD1-204ENST00000347968 IQCEQ6IPM2 695 aa18■□□□□ 0.47
MBD1-204ENST00000347968 MMGT1Q8N4V1 131 aa18■□□□□ 0.47
MBD1-204ENST00000347968 INCENPQ9NQS7 918 aa18■□□□□ 0.47
MBD1-204ENST00000347968 BIN2Q9UBW5 565 aaPredicted RBP18■□□□□ 0.47
MBD1-204ENST00000347968 MYH10P35580 1976 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 CCDC63Q8NA47 563 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 HAUS7Q99871 368 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 PAG1Q9NWQ8 432 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 ABL2P42684 1182 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 UBE3BQ7Z3V4 1068 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 RAPGEF5Q92565 580 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 PCMTD1Q96MG8 357 aaPredicted RBP17.99■□□□□ 0.47
MBD1-204ENST00000347968 LRRC4CQ9HCJ2 640 aa17.99■□□□□ 0.47
MBD1-204ENST00000347968 SLIT3O75094 1523 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 DRP2Q13474 957 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 SLC30A9Q6PML9 568 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 MAGEC3Q8TD91 643 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 ACSBG1Q96GR2 724 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 DSCC1Q9BVC3 393 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 EBF2Q9HAK2 575 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 RGPD5Q99666 1765 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 RANBP6O60518 1105 aaKnown RBP17.98■□□□□ 0.47
MBD1-204ENST00000347968 HLTFQ14527 1009 aaKnown RBP eCLIP17.98■□□□□ 0.47
MBD1-204ENST00000347968 C1orf141Q5JVX7 400 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 TRIM74Q86UV6 250 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 TRIM73Q86UV7 250 aa17.98■□□□□ 0.47
MBD1-204ENST00000347968 KIF2BQ8N4N8 673 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms