RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PLA2G6O60733 806 aa16.87■□□□□ 0.29
CXCL12-201ENST00000343575 VCAM1P19320 739 aa16.87■□□□□ 0.29
CXCL12-201ENST00000343575 STAT2P52630 851 aa16.87■□□□□ 0.29
CXCL12-201ENST00000343575 TMEM87AQ8NBN3 555 aa16.87■□□□□ 0.29
CXCL12-201ENST00000343575 ZMYND12Q9H0C1 365 aa16.87■□□□□ 0.29
CXCL12-201ENST00000343575 AS3MTQ9HBK9 375 aa16.87■□□□□ 0.29
CXCL12-201ENST00000343575 PRPF40AO75400 957 aaKnown RBP16.86■□□□□ 0.29
CXCL12-201ENST00000343575 NF2P35240 595 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 TOB1P50616 345 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-201ENST00000343575 NLRP5P59047 1200 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 CDC37Q16543 378 aaPredicted RBP16.86■□□□□ 0.29
CXCL12-201ENST00000343575 LDLRAD1Q5T700 205 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 C12orf42Q96LP6 360 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 PTPRFP10586 1907 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 WDR46O15213 610 aaKnown RBP16.86■□□□□ 0.29
CXCL12-201ENST00000343575 FIBPO43427 364 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 KRT2P35908 639 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 HMGCS2P54868 508 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 KRT85P78386 507 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 SAFBQ15424 915 aaKnown RBP eCLIP16.86■□□□□ 0.29
CXCL12-201ENST00000343575 ANKRD13AQ8IZ07 590 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 DAGLBQ8NCG7 672 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 PCDHA4Q9UN74 947 aa16.86■□□□□ 0.29
CXCL12-201ENST00000343575 hCG_1984214I3L0E3 225 aa16.85■□□□□ 0.29
CXCL12-201ENST00000343575 NCLP19338 710 aaKnown RBP16.85■□□□□ 0.29
CXCL12-201ENST00000343575 USP14P54578 494 aa16.85■□□□□ 0.29
CXCL12-201ENST00000343575 FAM177A1Q8N128 213 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-201ENST00000343575 ZNF713Q8N859 430 aaPredicted RBP16.85■□□□□ 0.29
CXCL12-201ENST00000343575 RASGRP4Q8TDF6 673 aa16.85■□□□□ 0.29
CXCL12-201ENST00000343575 ELP3Q9H9T3 547 aa16.85■□□□□ 0.29
CXCL12-201ENST00000343575 FEM1BQ9UK73 627 aa16.85■□□□□ 0.29
CXCL12-201ENST00000343575 CSADQ9Y600 493 aa16.85■□□□□ 0.29
CXCL12-201ENST00000343575 RLFQ13129 1914 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 C19orf81C9J6K1 198 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 GADD45BO75293 160 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 ITGBL1O95965 494 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 TAL1P17542 331 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 NAPAP54920 295 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 IKQ13123 557 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 ZSCAN23Q3MJ62 389 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 SH3D19Q5HYK7 790 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 BLIDQ8IZY5 108 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 LEO1Q8WVC0 666 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 CLIC4Q9Y696 253 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 SMCO2A6NFE2 343 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 WNT7AO00755 349 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 IRF6O14896 467 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 CEBPZQ03701 1054 aaKnown RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 CCDC148Q8NFR7 591 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 CHURC1Q8WUH1 139 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 KIFC2Q96AC6 838 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 RPAP3Q9H6T3 665 aaPredicted RBP16.84■□□□□ 0.29
CXCL12-201ENST00000343575 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 PCDHA6Q9UN73 950 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 PCDHA8Q9Y5H6 950 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
CXCL12-201ENST00000343575 SPDYE5A6NIY4 337 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 CALML3P27482 149 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 PPATQ06203 517 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.28
CXCL12-201ENST00000343575 ATL3Q6DD88 541 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 ARMC9Q7Z3E5 817 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 FAM160B2Q86V87 743 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 ERO1BQ86YB8 467 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 ZNF408Q9H9D4 720 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 RTEL1Q9NZ71 1219 aa16.83■□□□□ 0.28
CXCL12-201ENST00000343575 MBD3O95983 291 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 GALNT17Q6IS24 598 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 POLR3EQ9NVU0 708 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 CCDC39Q9UFE4 941 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 PCDHA1Q9Y5I3 950 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 ZNF536O15090 1300 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 ELP1O95163 1332 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 OPLAHO14841 1288 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 GJA5P36382 358 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 PTPAQ15257 358 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 CST9Q5W186 159 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 LINC00301Q8NCQ3 95 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 CCDC12Q8WUD4 166 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-201ENST00000343575 OTUD5Q96G74 571 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-201ENST00000343575 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 AMNQ9BXJ7 453 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-201ENST00000343575 CFAP45Q9UL16 551 aa16.82■□□□□ 0.28
CXCL12-201ENST00000343575 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 PIK3AP1Q6ZUJ8 805 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 FBXO11Q86XK2 927 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 PRPF38AQ8NAV1 312 aaKnown RBP16.81■□□□□ 0.28
CXCL12-201ENST00000343575 RBM46Q8TBY0 533 aaKnown RBP16.81■□□□□ 0.28
CXCL12-201ENST00000343575 GPT2Q8TD30 523 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 WNK4Q96J92 1243 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 PGBD1Q96JS3 809 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 SPATA32Q96LK8 384 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 TANGO6Q9C0B7 1094 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 C6orf50Q9HD87 102 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms