RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ALAS1P13196 640 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 ACVR2BQ13705 512 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 RCSD1Q6JBY9 416 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 SH3RF1Q7Z6J0 888 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 RWDD1Q9H446 243 aaPredicted RBP22.99■■□□□ 1.27
ITGA4-202ENST00000339307 PDLIM7Q9NR12 457 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 RNF146Q9NTX7 359 aa22.99■■□□□ 1.27
ITGA4-202ENST00000339307 SYNRGQ9UMZ2 1314 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 A0A0D9SFI3 127 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 CNTN2Q02246 1040 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 SNX17Q15036 470 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 ZNF467Q7Z7K2 595 aaPredicted RBP22.98■■□□□ 1.27
ITGA4-202ENST00000339307 SLC17A8Q8NDX2 589 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 VTI1AQ96AJ9 217 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 STARD7Q9NQZ5 370 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 DNAH12Q6ZR08 3092 aa22.98■■□□□ 1.27
ITGA4-202ENST00000339307 LAMA3Q16787 3333 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 FGAP02671 866 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 C6orf222P0C671 652 aaPredicted RBP22.97■■□□□ 1.27
ITGA4-202ENST00000339307 NMIQ13287 307 aaPredicted RBP22.97■■□□□ 1.27
ITGA4-202ENST00000339307 NOL8Q76FK4 1167 aaKnown RBP22.97■■□□□ 1.27
ITGA4-202ENST00000339307 ARMCX2Q7L311 632 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 RASGRP2Q7LDG7 609 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 NUP133Q8WUM0 1156 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 TRERF1Q96PN7 1200 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 ABHD16BQ9H3Z7 469 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 SPC25Q9HBM1 224 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 ANAPC4Q9UJX5 808 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 TACC3Q9Y6A5 838 aa22.97■■□□□ 1.27
ITGA4-202ENST00000339307 TRIM43BA6NCK2 446 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 ADAMTS4O75173 837 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 ACLYP53396 1101 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 HAND2P61296 217 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 KCNA10Q16322 511 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 CCDC144BQ3MJ40 725 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 C1orf53Q5VUE5 145 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 CCDC144CPQ8IYA2 1237 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 TRIM43Q96BQ3 446 aaPredicted RBP22.96■■□□□ 1.27
ITGA4-202ENST00000339307 PRR12Q9ULL5 1215 aa22.96■■□□□ 1.27
ITGA4-202ENST00000339307 ORC4O43929 436 aa22.95■■□□□ 1.26
ITGA4-202ENST00000339307 DUSP11O75319 330 aaKnown RBP22.95■■□□□ 1.26
ITGA4-202ENST00000339307 CLTBP09497 229 aa22.95■■□□□ 1.26
ITGA4-202ENST00000339307 SHHQ15465 462 aa22.95■■□□□ 1.26
ITGA4-202ENST00000339307 ALX1Q15699 326 aa22.95■■□□□ 1.26
ITGA4-202ENST00000339307 TSEN34Q9BSV6 310 aaKnown RBP22.95■■□□□ 1.26
ITGA4-202ENST00000339307 ZNF536O15090 1300 aa22.94■■□□□ 1.26
ITGA4-202ENST00000339307 MYADML2A6NDP7 307 aa22.94■■□□□ 1.26
ITGA4-202ENST00000339307 HSPD1P10809 573 aaKnown RBP22.94■■□□□ 1.26
ITGA4-202ENST00000339307 RAG1P15918 1043 aa22.94■■□□□ 1.26
ITGA4-202ENST00000339307 TKFCQ3LXA3 575 aa22.94■■□□□ 1.26
ITGA4-202ENST00000339307 ZNF589Q86UQ0 364 aaPredicted RBP22.94■■□□□ 1.26
ITGA4-202ENST00000339307 FAM161BQ96MY7 647 aa22.94■■□□□ 1.26
ITGA4-202ENST00000339307 A1CFQ9NQ94 594 aaKnown RBP22.94■■□□□ 1.26
ITGA4-202ENST00000339307 TMEM39AQ9NV64 488 aa22.94■■□□□ 1.26
ITGA4-202ENST00000339307 CCPG1Q9ULG6 757 aa22.94■■□□□ 1.26
ITGA4-202ENST00000339307 MOXD2PA6NHM9 499 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 DCDC2CA8MYV0 355 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 SLC16A2P36021 539 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 IRX5P78411 483 aaPredicted RBP22.93■■□□□ 1.26
ITGA4-202ENST00000339307 C9orf50Q5SZB4 431 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.93■■□□□ 1.26
ITGA4-202ENST00000339307 DCAF4Q8WV16 495 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 FGD4Q96M96 766 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 GLT1D1Q96MS3 346 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 GPCPD1Q9NPB8 672 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 MTMR10Q9NXD2 777 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 FRMPD2Q68DX3 1309 aaPredicted RBP22.93■■□□□ 1.26
ITGA4-202ENST00000339307 CCDC171Q6TFL3 1326 aa22.93■■□□□ 1.26
ITGA4-202ENST00000339307 PLA2G6O60733 806 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 AAMPQ13685 434 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 GNASQ5JWF2 1037 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 TTBK2Q6IQ55 1244 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 NSMFQ6X4W1 530 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 MFSD6Q6ZSS7 791 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 CHD1LQ86WJ1 897 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 PCSK9Q8NBP7 692 aaKnown RBP22.92■■□□□ 1.26
ITGA4-202ENST00000339307 KLHDC9Q8NEP7 349 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 LTBP2Q14767 1821 aa22.92■■□□□ 1.26
ITGA4-202ENST00000339307 ASB14A6NK59 587 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 ASGR1P07306 291 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 TOP1P11387 765 aaKnown RBP22.91■■□□□ 1.26
ITGA4-202ENST00000339307 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
ITGA4-202ENST00000339307 MUM1L1Q5H9M0 696 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 FAM133AQ8N9E0 248 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 TMEM47Q9BQJ4 181 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 MCM3APO60318 1980 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 SOWAHBA6NEL2 793 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 ADCY6O43306 1168 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 SDSP20132 328 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 TNFAIP2Q03169 654 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 EEPD1Q7L9B9 569 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 EXOC6Q8TAG9 804 aa22.91■■□□□ 1.26
ITGA4-202ENST00000339307 DDX49Q9Y6V7 483 aaKnown RBP22.91■■□□□ 1.26
ITGA4-202ENST00000339307 IGHDP01880 384 aa22.9■■□□□ 1.26
ITGA4-202ENST00000339307 FGRP09769 529 aa22.9■■□□□ 1.26
ITGA4-202ENST00000339307 ITGB8P26012 769 aa22.9■■□□□ 1.26
ITGA4-202ENST00000339307 SMC5Q8IY18 1101 aa22.9■■□□□ 1.26
ITGA4-202ENST00000339307 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.89■■□□□ 1.25
ITGA4-202ENST00000339307 ICAM1P05362 532 aa22.89■■□□□ 1.25
ITGA4-202ENST00000339307 GJA9P57773 515 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms