RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 GPR75-ASB3A0A0A6YYF3 556 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 NT5DC1Q5TFE4 455 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 TEX11Q8IYF3 940 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 ZNF444Q8N0Y2 327 aaPredicted RBP21.16■□□□□ 0.98
PSPC1-201ENST00000338910 MLKLQ8NB16 471 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 TMX4Q9H1E5 349 aaPredicted RBP21.16■□□□□ 0.98
PSPC1-201ENST00000338910 FAN1Q9Y2M0 1017 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 CNTNAP5Q8WYK1 1306 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 AKR1B15C9JRZ8 316 aaPredicted RBP21.16■□□□□ 0.98
PSPC1-201ENST00000338910 TSPY3P0CV98 308 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 TSPY8P0CW00 308 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 VEGFAP15692 232 aaPredicted RBP21.16■□□□□ 0.98
PSPC1-201ENST00000338910 KRT2P35908 639 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 TUBB4BP68371 445 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 TUBB2AQ13885 445 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 RAD9BQ6WBX8 426 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 MED15Q96RN5 788 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 TUBB2BQ9BVA1 445 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 SUGCTQ9HAC7 445 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 MTMR7Q9Y216 660 aa21.16■□□□□ 0.98
PSPC1-201ENST00000338910 FOXR1Q6PIV2 292 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 TRMT44Q8IYL2 757 aaKnown RBP21.15■□□□□ 0.98
PSPC1-201ENST00000338910 A0A0U1RQJ8 604 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 A0A1B0GTH6 734 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 KIF5CO60282 957 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 POSTNQ15063 836 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 DGKHQ86XP1 1220 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 PNMA1Q8ND90 353 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 ATRIPQ8WXE1 791 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 ZFP91Q96JP5 570 aaPredicted RBP21.15■□□□□ 0.98
PSPC1-201ENST00000338910 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 FBXO2Q9UK22 296 aaPredicted RBP21.15■□□□□ 0.98
PSPC1-201ENST00000338910 RGPD3A6NKT7 1758 aaPredicted RBP21.15■□□□□ 0.98
PSPC1-201ENST00000338910 RGPD4Q7Z3J3 1758 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 MYH6P13533 1939 aa21.15■□□□□ 0.98
PSPC1-201ENST00000338910 F8W031 263 aaPredicted RBP21.14■□□□□ 0.97
PSPC1-201ENST00000338910 H0YIN7 160 aa21.14■□□□□ 0.97
PSPC1-201ENST00000338910 SARSP49591 514 aaKnown RBP21.14■□□□□ 0.97
PSPC1-201ENST00000338910 NOM1Q5C9Z4 860 aaKnown RBP21.14■□□□□ 0.97
PSPC1-201ENST00000338910 SAMSN1Q9NSI8 373 aaKnown RBP21.14■□□□□ 0.97
PSPC1-201ENST00000338910 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
PSPC1-201ENST00000338910 HOOK1Q9UJC3 728 aaKnown RBP21.14■□□□□ 0.97
PSPC1-201ENST00000338910 PTPREP23469 700 aa21.14■□□□□ 0.97
PSPC1-201ENST00000338910 CHRNA5P30532 468 aa21.14■□□□□ 0.97
PSPC1-201ENST00000338910 MORC3Q14149 939 aa21.14■□□□□ 0.97
PSPC1-201ENST00000338910 GOLGA6L1Q8N7Z2 621 aa21.14■□□□□ 0.97
PSPC1-201ENST00000338910 MXD3Q9BW11 206 aa21.14■□□□□ 0.97
PSPC1-201ENST00000338910 NAA15Q9BXJ9 866 aaKnown RBP21.14■□□□□ 0.97
PSPC1-201ENST00000338910 DACH1Q9UI36 760 aa21.14■□□□□ 0.97
PSPC1-201ENST00000338910 MAGEA9P43362 315 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 WWC2Q6AWC2 1192 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 STAG2Q8N3U4 1231 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 CERS5Q8N5B7 392 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 FAM163AQ96GL9 167 aaPredicted RBP21.13■□□□□ 0.97
PSPC1-201ENST00000338910 PDGFDQ9GZP0 370 aaPredicted RBP21.13■□□□□ 0.97
PSPC1-201ENST00000338910 STX8Q9UNK0 236 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 SCG2P13521 617 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 KIF5BP33176 963 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 RHBDL3P58872 404 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 VSNL1P62760 191 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 CASP8Q14790 479 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 FAM71BQ8TC56 605 aa21.13■□□□□ 0.97
PSPC1-201ENST00000338910 PRR29P0C7W0 189 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 RASA1P20936 1047 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 NPY5RQ15761 445 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 ZNF569Q5MCW4 686 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 RASGRP2Q7LDG7 609 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 APTXQ7Z2E3 356 aaKnown RBP21.12■□□□□ 0.97
PSPC1-201ENST00000338910 SLF2Q8IX21 1173 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 BRMS1Q9HCU9 246 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 CEP131Q9UPN4 1083 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 DLEC1Q9Y238 1755 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 TRIM75PA6NK02 468 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 G3V3G9 751 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 NLRP5P59047 1200 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 DCAF8Q5TAQ9 597 aa21.12■□□□□ 0.97
PSPC1-201ENST00000338910 GAKO14976 1311 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 FLT1P17948 1338 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 ROBO3Q96MS0 1386 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 WNT7AO00755 349 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 PLCG2P16885 1265 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 CDK8P49336 464 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 IRX3P78415 501 aaPredicted RBP21.11■□□□□ 0.97
PSPC1-201ENST00000338910 CERS3Q8IU89 383 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 TRIML1Q8N9V2 468 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 DAGLAQ9Y4D2 1042 aa21.11■□□□□ 0.97
PSPC1-201ENST00000338910 SRPRBQ9Y5M8 271 aaKnown RBP21.11■□□□□ 0.97
PSPC1-201ENST00000338910 CTAGE9A4FU28 777 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 EIF3CLB5ME19 914 aaKnown RBP21.1■□□□□ 0.97
PSPC1-201ENST00000338910 TEX33O43247 280 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 PFKFB3Q16875 520 aaPredicted RBP21.1■□□□□ 0.97
PSPC1-201ENST00000338910 KIF4BQ2VIQ3 1234 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 ICE2Q659A1 982 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 USP49Q70CQ1 688 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 EIF3CQ99613 913 aaKnown RBP21.1■□□□□ 0.97
PSPC1-201ENST00000338910 DBNDD1Q9H9R9 158 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 ADAMTS3O15072 1205 aa21.1■□□□□ 0.97
PSPC1-201ENST00000338910 POLR2DO15514 142 aaKnown RBP21.1■□□□□ 0.97
PSPC1-201ENST00000338910 TFRCP02786 760 aaKnown RBP21.1■□□□□ 0.97
PSPC1-201ENST00000338910 RHOXF2BP0C7M4 288 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms