RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MOB2Q70IA6 237 aa16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 FEM1BQ9UK73 627 aa16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 CSADQ9Y600 493 aa16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PLA2G6O60733 806 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 GNA11P29992 359 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 STK38Q15208 465 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 FAM160B2Q86V87 743 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 LINC00301Q8NCQ3 95 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PCDHA6Q9UN73 950 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PCDHA8Q9Y5H6 950 aa16.91■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ESYT2A0FGR8 921 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 M0R2N6 131 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 YEATS4O95619 227 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PPP1R18Q6NYC8 613 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PGBD1Q96JS3 809 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 AFG3L2Q9Y4W6 797 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PCDHA1Q9Y5I3 950 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 MBD3O95983 291 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 VCAM1P19320 739 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ADCY7P51828 1080 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 HMGCS2P54868 508 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ZNF526Q8TF50 670 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 AMNQ9BXJ7 453 aa16.9■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.3
CDK5RAP3-201ENST00000338399 GOLGA6L4A6NEF3 574 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TRAF5O00463 557 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USH1GQ495M9 461 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ANKRD13AQ8IZ07 590 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ELP3Q9H9T3 547 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 NOL7Q9UMY1 257 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 SPTLC2O15270 562 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ME1P48163 572 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PTPAQ15257 358 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 MAP3K11Q16584 847 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ARMC9Q7Z3E5 817 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 BICD2Q8TD16 824 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 RPAP3Q9H6T3 665 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 BIN2Q9UBW5 565 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TAL1P17542 331 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 REXO1Q8N1G1 1221 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 KCNG4Q8TDN1 519 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 SLF1Q9BQI6 1058 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ZNF408Q9H9D4 720 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 RIC8AQ9NPQ8 531 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PCDHA7Q9UN72 937 aa16.88■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PTPRFP10586 1907 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 WNT7AO00755 349 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 MARCKSP29966 332 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 JAKMIP3Q5VZ66 844 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PRPF38AQ8NAV1 312 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CUL5Q93034 780 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PARP14Q460N5 1801 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 FLOT1O75955 427 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 MRPL12P52815 198 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 UBE2SQ16763 222 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TTC38Q5R3I4 469 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 KRT25Q7Z3Z0 450 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TMOD4Q9NZQ9 345 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TRAPPC10P48553 1259 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ZNF174Q15697 407 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 INF2Q27J81 1249 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PPP6R2O75170 966 aa16.85■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PPATQ06203 517 aa16.85■□□□□ 0.29
CDK5RAP3-201ENST00000338399 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDK5RAP3-201ENST00000338399 SH3D19Q5HYK7 790 aa16.85■□□□□ 0.29
CDK5RAP3-201ENST00000338399 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-201ENST00000338399 PPP1R9AQ9ULJ8 1098 aa16.85■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
CDK5RAP3-201ENST00000338399 CLK2P49760 499 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 ADALQ6DHV7 355 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 JMYQ8N9B5 988 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 GLT8D2Q9H1C3 349 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 TMEM63CQ9P1W3 806 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 SPDYE5A6NIY4 337 aa16.84■□□□□ 0.29
CDK5RAP3-201ENST00000338399 USP17L15C9J2P7 530 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms