RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 BICC1Q9H694 974 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SSH2Q76I76 1423 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 DAB2P98082 770 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 CUL3Q13618 768 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SLC30A9Q6PML9 568 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 LRRC8AQ8IWT6 810 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TAB2Q9NYJ8 693 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 WARS2Q9UGM6 360 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 INTUQ9ULD6 942 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SUFUQ9UMX1 484 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 APLFQ8IW19 511 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 HELLSQ9NRZ9 838 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 CDC23Q9UJX2 597 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 F6X3S4 739 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 DKC1O60832 514 aaKnown RBP eCLIP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 BASP1P80723 227 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 AP1B1Q10567 949 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 KLC3Q6P597 504 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 MRPL44Q9H9J2 332 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 CARSP49589 748 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 NBPF20Q3BBV1 942 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 MAML1Q92585 1016 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TRPC6Q9Y210 931 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 RPS6KB1P23443 525 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 DDIT3P35638 169 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 MORC3Q14149 939 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 PPP2R5BQ15173 497 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SKAP1Q86WV1 359 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 ANKRD44Q8N8A2 993 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 MID2Q9UJV3 735 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 ZMYM3Q14202 1370 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 PCF11O94913 1555 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 RNF113AO15541 343 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 ALDH1L1O75891 902 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 NPR1P16066 1061 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TEX9Q8N6V9 391 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 THUMPD2Q9BTF0 503 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 PRR23D1E9PI22 279 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SLFN14P0C7P3 912 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 PRR23D2P0DMB1 279 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SCG2P13521 617 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 ATF7P17544 494 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 STAT1P42224 750 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 DRP2Q13474 957 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 ANO5Q75V66 913 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 MTBPQ96DY7 904 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TCEANC2Q96MN5 208 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 KIF17Q9P2E2 1029 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TPCN1Q9ULQ1 816 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SCAF11Q99590 1463 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 BACH1O14867 736 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 PDHA1P08559 390 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 IL15P40933 162 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 PPARDQ03181 441 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TTLL3Q9Y4R7 772 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 MAGEB6P1A0A0J9YX57 407 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 HSPA6P17066 643 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 MSH2P43246 934 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 NNTQ13423 1086 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 EMBQ6PCB8 327 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 DESI2Q9BSY9 194 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 STX18Q9P2W9 335 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TRIM33Q9UPN9 1127 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 CYP7A1P22680 504 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 ZNF804AQ7Z570 1209 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 TTC25Q96NG3 672 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 SUCLA2Q9P2R7 463 aaPredicted RBP6.71□□□□□ -1.33
CSMD1-201ENST00000335551 SLC13A4Q9UKG4 626 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 TRPC5Q9UL62 973 aaPredicted RBP6.71□□□□□ -1.33
CSMD1-201ENST00000335551 CD2APQ9Y5K6 639 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 MMEP08473 750 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 ACTN1P12814 892 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 PDE6BP35913 854 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 HOOK2Q96ED9 719 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 RIOK1Q9BRS2 568 aaKnown RBP6.71□□□□□ -1.33
CSMD1-201ENST00000335551 MBIPQ9NS73 344 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 SNX5Q9Y5X3 404 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 DNM2P50570 870 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 ARHGDIAP52565 204 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 HIBCHQ6NVY1 386 aaPredicted RBP6.71□□□□□ -1.33
CSMD1-201ENST00000335551 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 PARP9Q8IXQ6 854 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 PPP1R13BQ96KQ4 1090 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 OSBPL1AQ9BXW6 950 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 MAGEF1Q9HAY2 307 aa6.71□□□□□ -1.33
CSMD1-201ENST00000335551 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.71□□□□□ -1.33
CSMD1-201ENST00000335551 KIF1BO60333 1816 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 PMS1P54277 932 aaKnown RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 ADCY2Q08462 1091 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 ATP2B3Q16720 1220 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 MRPS26Q9BYN8 205 aaKnown RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 YIPF3Q9GZM5 350 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 FAM207AQ9NSI2 230 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 ANGEL1Q9UNK9 670 aaKnown RBP6.71□□□□□ -1.34
CSMD1-201ENST00000335551 ARAP1Q96P48 1450 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 KMT5BQ4FZB7 885 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 TMEM87BQ96K49 555 aa6.71□□□□□ -1.34
CSMD1-201ENST00000335551 FAM96AQ9H5X1 160 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms