RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 KIF9Q9HAQ2 790 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 SLC12A6Q9UHW9 1150 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
SKA2-201ENST00000330137 ACEP12821 1306 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 PRR36Q9H6K5 1346 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 ECM29Q5VYK3 1845 aa9.32□□□□□ -0.92
SKA2-201ENST00000330137 A6NHS1 94 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 H7C1W4 665 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 PDLIM1O00151 329 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 FOXN1O15353 648 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 CCND1P24385 295 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 C2orf54Q08AI8 447 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 DPYDQ12882 1025 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 BLMHQ13867 455 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 CDC37Q16543 378 aaPredicted RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 ZC3H12AQ5D1E8 599 aaKnown RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 NSMCE1Q8WV22 266 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 ALS2CR12Q96Q35 445 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 JADE2Q9NQC1 790 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 HAUS2Q9NVX0 235 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 PAG1Q9NWQ8 432 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 RMND1Q9NWS8 449 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 DMGDHQ9UI17 866 aaKnown RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 LCA5LO95447 670 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 EIF2S2P20042 333 aaKnown RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 RAB27AP51159 221 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 ROR2Q01974 943 aaKnown RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 PDIA5Q14554 519 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 HSP90AA4PQ58FG1 418 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 GSPT2Q8IYD1 628 aaKnown RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 ANKS4BQ8N8V4 417 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 CFAP61Q8NHU2 1237 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 L3MBTL3Q96JM7 780 aaPredicted RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 TMEM87BQ96K49 555 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 CAPZA3Q96KX2 299 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 PLCD4Q9BRC7 762 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 SLC39A2Q9NP94 309 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 CWC25Q9NXE8 425 aaPredicted RBP9.31□□□□□ -0.92
SKA2-201ENST00000330137 RIPOR2Q9Y4F9 1068 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 NWD2Q9ULI1 1742 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 SLIT3O75094 1523 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 DISP2A7MBM2 1401 aa9.31□□□□□ -0.92
SKA2-201ENST00000330137 LGALS16A8MUM7 142 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 SRGAP2O75044 1071 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 ZMYND10O75800 440 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 RFX5P48382 616 aaPredicted RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 ATP1A2P50993 1020 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 ATP2B2Q01814 1243 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 IFI16Q16666 785 aaKnown RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 SLC30A9Q6PML9 568 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 RALYLQ86SE5 291 aaKnown RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 PIK3R5Q8WYR1 880 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 FERMT2Q96AC1 680 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 HVCN1Q96D96 273 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 GDAP1L1Q96MZ0 367 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 CHP1Q99653 195 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 STRN4Q9NRL3 753 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 ANGEL1Q9UNK9 670 aaKnown RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 SLC12A4Q9UP95 1085 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 LEMD3Q9Y2U8 911 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 C1orf167Q5SNV9 1468 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 CES2O00748 559 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 ASAP2O43150 1006 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 MYZAPP0CAP1 466 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 HNRNPH3P31942 346 aaKnown RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 DNM2P50570 870 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 METAP2P50579 478 aaKnown RBP eCLIP9.3□□□□□ -0.92
SKA2-201ENST00000330137 RCAN1P53805 252 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 MTMR3Q13615 1198 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 CFAP221Q4G0U5 840 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 WDR59Q6PJI9 974 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 ARHGAP27Q6ZUM4 889 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 RNF10Q8N5U6 811 aaKnown RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 MB21D1Q8N884 522 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 SMCR8Q8TEV9 937 aaPredicted RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 LRRC45Q96CN5 670 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 DTNBP1Q96EV8 351 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 CCDC43Q96MW1 224 aaKnown RBP9.3□□□□□ -0.92
SKA2-201ENST00000330137 CTNNAL1Q9UBT7 734 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 MAST3O60307 1309 aa9.3□□□□□ -0.92
SKA2-201ENST00000330137 CCT8L1PA6NM43 557 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 KCNJ18B7U540 433 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 E7ENQ6 273 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 ORC4O43929 436 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 KRT14P02533 472 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 IARSP41252 1262 aaKnown RBP9.29□□□□□ -0.92
SKA2-201ENST00000330137 ZBED6P86452 979 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 PAK1Q13153 545 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 KCNJ12Q14500 433 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 KCNB1Q14721 858 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 CCDC181Q5TID7 509 aa9.29□□□□□ -0.92
SKA2-201ENST00000330137 CWF19L1Q69YN2 538 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms