RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 SNHG28P0DPA3 235 aa25.05■■□□□ 1.6
UBE2D3-201ENST00000321805 RASGRP2Q7LDG7 609 aa25.05■■□□□ 1.6
UBE2D3-201ENST00000321805 KRT23Q9C075 422 aa25.05■■□□□ 1.6
UBE2D3-201ENST00000321805 RANBP17Q9H2T7 1088 aaKnown RBP25.05■■□□□ 1.6
UBE2D3-201ENST00000321805 RNF146Q9NTX7 359 aa25.05■■□□□ 1.6
UBE2D3-201ENST00000321805 MTMR7Q9Y216 660 aa25.05■■□□□ 1.6
UBE2D3-201ENST00000321805 ZNF865P0CJ78 1059 aaPredicted RBP25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 AKR1A1P14550 325 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 CHMLP26374 656 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 PRAMEF19Q5SWL8 479 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 SYDE2Q5VT97 1194 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 CHRDL2Q6WN34 429 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 ANKS1AQ92625 1134 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 AGBL1Q96MI9 1066 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 IL25Q9H293 177 aa25.04■■□□□ 1.6
UBE2D3-201ENST00000321805 KBTBD13C9JR72 458 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 KDM4AO75164 1064 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 ICAM1P05362 532 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 RARBP10826 455 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 ZNF543Q08ER8 600 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 GPATCH4Q5T3I0 446 aaKnown RBP25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 C7orf61Q8IZ16 206 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 PRO3102Q9H379 93 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 HOMER2Q9NSB8 354 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 SMCHD1A6NHR9 2005 aa25.03■■□□□ 1.6
UBE2D3-201ENST00000321805 B4E1Z4 1266 aa25.02■■□□□ 1.6
UBE2D3-201ENST00000321805 CCDC174Q6PII3 467 aa25.02■■□□□ 1.6
UBE2D3-201ENST00000321805 CHMP4CQ96CF2 233 aa25.02■■□□□ 1.6
UBE2D3-201ENST00000321805 TRERF1Q96PN7 1200 aa25.02■■□□□ 1.6
UBE2D3-201ENST00000321805 A1CFQ9NQ94 594 aaKnown RBP25.02■■□□□ 1.6
UBE2D3-201ENST00000321805 CCPG1Q9ULG6 757 aa25.02■■□□□ 1.6
UBE2D3-201ENST00000321805 TRIOBPQ9H2D6 2365 aa25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 ALAS1P13196 640 aa25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 TTBK2Q6IQ55 1244 aa25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 FAM133AQ8N9E0 248 aa25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 FGD4Q96M96 766 aa25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 ZSCAN10Q96SZ4 725 aaPredicted RBP25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 SENP6Q9GZR1 1112 aaPredicted RBP25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 ABHD16BQ9H3Z7 469 aa25.01■■□□□ 1.59
UBE2D3-201ENST00000321805 A0A1W2PPC1 479 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 POTEB2H3BUK9 544 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 SNAI1O95863 264 aaPredicted RBP25■■□□□ 1.59
UBE2D3-201ENST00000321805 LRRC41Q15345 812 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 LRRC26Q2I0M4 334 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 ANO1Q5XXA6 986 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 PNMA1Q8ND90 353 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 ZKSCAN3Q9BRR0 538 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 XPNPEP3Q9NQH7 507 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 ZSWIM5Q9P217 1185 aa25■■□□□ 1.59
UBE2D3-201ENST00000321805 FRMPD2Q68DX3 1309 aaPredicted RBP25■■□□□ 1.59
UBE2D3-201ENST00000321805 RANBP2P49792 3224 aaKnown RBP24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 SGSM2O43147 1006 aa24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 TAL1P17542 331 aaPredicted RBP24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 SLC16A2P36021 539 aa24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 GJC2Q5T442 439 aaPredicted RBP24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 CENPQQ7L2Z9 268 aaPredicted RBP24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 RNF180Q86T96 592 aa24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 WDR19Q8NEZ3 1342 aa24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 KAT14Q9H8E8 782 aa24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 GPCPD1Q9NPB8 672 aa24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 FAM184BQ9ULE4 1060 aa24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 U3KPZ7 1027 aaPredicted RBP24.99■■□□□ 1.59
UBE2D3-201ENST00000321805 MCM3APO60318 1980 aa24.98■■□□□ 1.59
UBE2D3-201ENST00000321805 TNKSO95271 1327 aa24.98■■□□□ 1.59
UBE2D3-201ENST00000321805 ARMCX2Q7L311 632 aa24.98■■□□□ 1.59
UBE2D3-201ENST00000321805 ENAHQ8N8S7 591 aaPredicted RBP24.98■■□□□ 1.59
UBE2D3-201ENST00000321805 UBAC1Q9BSL1 405 aa24.98■■□□□ 1.59
UBE2D3-201ENST00000321805 RBM27Q9P2N5 1060 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-201ENST00000321805 ASB14A6NK59 587 aa24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 SNAP25P60880 206 aa24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 TRDNQ13061 729 aa24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 ACVR2BQ13705 512 aa24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 ASPRV1Q53RT3 343 aa24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 CYP39A1Q9NYL5 469 aa24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 ZHX1Q9UKY1 873 aaPredicted RBP24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 DNAH12Q6ZR08 3092 aa24.97■■□□□ 1.59
UBE2D3-201ENST00000321805 LOC102724159A0A0B4J2E5 919 aa24.96■■□□□ 1.59
UBE2D3-201ENST00000321805 PWP2Q15269 919 aaKnown RBP24.96■■□□□ 1.59
UBE2D3-201ENST00000321805 MUM1L1Q5H9M0 696 aa24.96■■□□□ 1.59
UBE2D3-201ENST00000321805 GDF15Q99988 308 aa24.96■■□□□ 1.59
UBE2D3-201ENST00000321805 ZMYND8Q9ULU4 1186 aaPredicted RBP24.96■■□□□ 1.59
UBE2D3-201ENST00000321805 PHF24Q9UPV7 400 aa24.96■■□□□ 1.59
UBE2D3-201ENST00000321805 DUSP11O75319 330 aaKnown RBP24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 CYP21A2P08686 494 aa24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 BMP8BP34820 402 aa24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 FXR1P51114 621 aaKnown RBP eCLIP24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 CNTN2Q02246 1040 aa24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 PTH1RQ03431 593 aa24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 SNX17Q15036 470 aa24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 C1orf53Q5VUE5 145 aa24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 CCDC144CPQ8IYA2 1237 aa24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 TSEN34Q9BSV6 310 aaKnown RBP24.95■■□□□ 1.58
UBE2D3-201ENST00000321805 ADAMTS4O75173 837 aa24.94■■□□□ 1.58
UBE2D3-201ENST00000321805 MAF1Q9H063 256 aa24.94■■□□□ 1.58
UBE2D3-201ENST00000321805 KATNBL1Q9H079 304 aa24.94■■□□□ 1.58
UBE2D3-201ENST00000321805 SYNRGQ9UMZ2 1314 aa24.93■■□□□ 1.58
UBE2D3-201ENST00000321805 SOWAHBA6NEL2 793 aa24.93■■□□□ 1.58
UBE2D3-201ENST00000321805 PGK1P00558 417 aa24.93■■□□□ 1.58
UBE2D3-201ENST00000321805 IFIT1BQ5T764 474 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms