RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 HAUS7Q99871 368 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 ATG3Q9NT62 314 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 USH1CQ9Y6N9 552 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 ERBB3P21860 1342 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 A0A1B0GTH6 734 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
PACS1-201ENST00000320580 ADAMTS2O95450 1211 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 SYF2O95926 243 aaKnown RBP18.33■□□□□ 0.53
PACS1-201ENST00000320580 PTGISQ16647 500 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 PREPLQ4J6C6 727 aaPredicted RBP18.33■□□□□ 0.53
PACS1-201ENST00000320580 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.53
PACS1-201ENST00000320580 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.52
PACS1-201ENST00000320580 TTC38Q5R3I4 469 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 TMTC2Q8N394 836 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 MYCBPAPQ8TBZ2 947 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 LGR6Q9HBX8 967 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 NOD2Q9HC29 1040 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 KLHL14Q9P2G3 628 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 TFR2Q9UP52 801 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 ZMYM6O95789 1325 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 ANO9A1A5B4 782 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 TAOK1Q7L7X3 1001 aa18.33■□□□□ 0.52
PACS1-201ENST00000320580 RAB3IPQ96QF0 476 aaPredicted RBP18.33■□□□□ 0.52
PACS1-201ENST00000320580 FAM107AO95990 144 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 RNF168Q8IYW5 571 aaPredicted RBP18.32■□□□□ 0.52
PACS1-201ENST00000320580 SPDYE1Q8NFV5 336 aaPredicted RBP18.32■□□□□ 0.52
PACS1-201ENST00000320580 OSBPL9Q96SU4 736 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 G3BP2Q9UN86 482 aaKnown RBP18.32■□□□□ 0.52
PACS1-201ENST00000320580 KCNQ3O43525 872 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 SUN1O94901 812 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 FERMT2Q96AC1 680 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 CNNM2Q9H8M5 875 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 PLCB1Q9NQ66 1216 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 FLT4P35916 1363 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 FTCDO95954 541 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 IFIT5Q13325 482 aaKnown RBP18.32■□□□□ 0.52
PACS1-201ENST00000320580 HOOK2Q96ED9 719 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 VPS54Q9P1Q0 977 aa18.32■□□□□ 0.52
PACS1-201ENST00000320580 TTC26A0AVF1 554 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 KRIT1O00522 736 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 AP1G2O75843 785 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 ZNF131P52739 623 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 TUBGCP2Q9BSJ2 902 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 MAGOHP61326 146 aaKnown RBP18.31■□□□□ 0.52
PACS1-201ENST00000320580 DTHD1Q6ZMT9 781 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 MAGOHBQ96A72 148 aaKnown RBP18.31■□□□□ 0.52
PACS1-201ENST00000320580 OSBPL1AQ9BXW6 950 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 UBA5Q9GZZ9 404 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 ATP8A1Q9Y2Q0 1164 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 SNUPNO95149 360 aaKnown RBP18.31■□□□□ 0.52
PACS1-201ENST00000320580 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
PACS1-201ENST00000320580 APPBP2Q92624 585 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 CUL5Q93034 780 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 EPSTI1Q96J88 318 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 MLXIPQ9HAP2 919 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 MROH7-TTC4A0A0A0MT08 1334 aa18.31■□□□□ 0.52
PACS1-201ENST00000320580 DHX9Q08211 1270 aaKnown RBP18.3■□□□□ 0.52
PACS1-201ENST00000320580 TRAF1Q13077 416 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 NR5A1Q13285 461 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 SMCR8Q8TEV9 937 aaPredicted RBP18.3■□□□□ 0.52
PACS1-201ENST00000320580 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 TSGA10IPQ3SY00 556 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 PIK3AP1Q6ZUJ8 805 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 TBC1D22AQ8WUA7 517 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 SEC16BQ96JE7 1060 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 PHF20L1A8MW92 1017 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 ACTN4O43707 911 aaKnown RBP18.3■□□□□ 0.52
PACS1-201ENST00000320580 FSBPO95073 299 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 AARSP49588 968 aaKnown RBP eCLIP18.3■□□□□ 0.52
PACS1-201ENST00000320580 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 SMARCAL1Q9NZC9 954 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 NCK2O43639 380 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 TMOD1P28289 359 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 TCP11X2Q5H9J9 407 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 HOMER3Q9NSC5 361 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 SERPINA10Q9UK55 444 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 PCDHB6Q9Y5E3 794 aa18.3■□□□□ 0.52
PACS1-201ENST00000320580 V9GY48 417 aaPredicted RBP18.3■□□□□ 0.52
PACS1-201ENST00000320580 PNPLA6Q8IY17 1366 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 KSR1Q8IVT5 923 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 A0A0U1RQJ8 604 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 GYPCP04921 128 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 GSCP56915 257 aaPredicted RBP18.29■□□□□ 0.52
PACS1-201ENST00000320580 PPP2R2AP63151 447 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 AMOTQ4VCS5 1084 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 CWC25Q9NXE8 425 aaPredicted RBP18.29■□□□□ 0.52
PACS1-201ENST00000320580 SCOCQ9UIL1 159 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 H0Y3Z8 333 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 CABP4P57796 275 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 PLCB4Q15147 1175 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 PDCD2Q16342 344 aaPredicted RBP18.29■□□□□ 0.52
PACS1-201ENST00000320580 LDHAL6AQ6ZMR3 332 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 MIPOL1Q8TD10 442 aa18.29■□□□□ 0.52
PACS1-201ENST00000320580 FAM114A2Q9NRY5 505 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms