RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MRPL12P52815 198 aaKnown RBP20.32■□□□□ 0.84
RAB39A-201ENST00000320578 GRIN1Q05586 938 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 RASGRP4Q8TDF6 673 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 GOPCQ9HD26 462 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 TUBE1Q9UJT0 475 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 GJA3Q9Y6H8 435 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 H7C1D1 291 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 PPP1R11O60927 126 aaPredicted RBP20.32■□□□□ 0.84
RAB39A-201ENST00000320578 LONP1P36776 959 aaKnown RBP20.32■□□□□ 0.84
RAB39A-201ENST00000320578 TRAF1Q13077 416 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 KIF4BQ2VIQ3 1234 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 MCTP2Q6DN12 878 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 GPC2Q8N158 579 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 CCDC34Q96HJ3 373 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 ZNF541Q9H0D2 1346 aa20.32■□□□□ 0.84
RAB39A-201ENST00000320578 MCM7P33993 719 aa20.31■□□□□ 0.84
RAB39A-201ENST00000320578 SLC16A2P36021 539 aa20.31■□□□□ 0.84
RAB39A-201ENST00000320578 CLK2P49760 499 aaKnown RBP20.31■□□□□ 0.84
RAB39A-201ENST00000320578 INF2Q27J81 1249 aa20.31■□□□□ 0.84
RAB39A-201ENST00000320578 NEK8Q86SG6 692 aa20.31■□□□□ 0.84
RAB39A-201ENST00000320578 CNNM3Q8NE01 707 aa20.31■□□□□ 0.84
RAB39A-201ENST00000320578 COA7Q96BR5 231 aa20.31■□□□□ 0.84
RAB39A-201ENST00000320578 HOOK2Q96ED9 719 aa20.31■□□□□ 0.84
RAB39A-201ENST00000320578 PHF20L1A8MW92 1017 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 QRICH1Q2TAL8 776 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 LONRF3Q496Y0 759 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 SYDE2Q5VT97 1194 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 CUL5Q93034 780 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 EGFRP00533 1210 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 ZNF165P49910 485 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 MDM2Q00987 491 aaPredicted RBP20.3■□□□□ 0.84
RAB39A-201ENST00000320578 CDC37Q16543 378 aaPredicted RBP20.3■□□□□ 0.84
RAB39A-201ENST00000320578 ARHGAP27Q6ZUM4 889 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 SAMD7Q7Z3H4 446 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 CDAN1Q8IWY9 1227 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 CBX8Q9HC52 389 aa20.3■□□□□ 0.84
RAB39A-201ENST00000320578 MIGA2Q7L4E1 593 aa20.29■□□□□ 0.84
RAB39A-201ENST00000320578 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
RAB39A-201ENST00000320578 BPIFA3Q9BQP9 254 aa20.29■□□□□ 0.84
RAB39A-201ENST00000320578 FHDC1Q9C0D6 1143 aaPredicted RBP20.29■□□□□ 0.84
RAB39A-201ENST00000320578 NAT10Q9H0A0 1025 aaKnown RBP20.29■□□□□ 0.84
RAB39A-201ENST00000320578 VCPKMTQ9H867 229 aa20.29■□□□□ 0.84
RAB39A-201ENST00000320578 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
RAB39A-201ENST00000320578 TMEM232C9JQI7 657 aa20.28■□□□□ 0.84
RAB39A-201ENST00000320578 POLR2DO15514 142 aaKnown RBP20.28■□□□□ 0.84
RAB39A-201ENST00000320578 NLRP12P59046 1061 aa20.28■□□□□ 0.84
RAB39A-201ENST00000320578 ZRSR1Q15695 479 aaKnown RBP20.28■□□□□ 0.84
RAB39A-201ENST00000320578 TBC1D10BQ4KMP7 808 aaPredicted RBP20.28■□□□□ 0.84
RAB39A-201ENST00000320578 SPECC1Q5M775 1068 aa20.28■□□□□ 0.84
RAB39A-201ENST00000320578 SYMPKQ92797 1274 aaKnown RBP20.28■□□□□ 0.84
RAB39A-201ENST00000320578 AMNQ9BXJ7 453 aa20.28■□□□□ 0.84
RAB39A-201ENST00000320578 DNAJC25Q9H1X3 360 aa20.28■□□□□ 0.84
RAB39A-201ENST00000320578 GPRC5DQ9NZD1 345 aa20.28■□□□□ 0.84
RAB39A-201ENST00000320578 VWA3AA6NCI4 1184 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 ACTN4O43707 911 aaKnown RBP20.27■□□□□ 0.84
RAB39A-201ENST00000320578 CTNND1O60716 968 aaKnown RBP20.27■□□□□ 0.84
RAB39A-201ENST00000320578 HS1BP3Q53T59 392 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 ACER1Q8TDN7 264 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 TBCKQ8TEA7 893 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 NAP1L4Q99733 375 aaKnown RBP20.27■□□□□ 0.84
RAB39A-201ENST00000320578 DEFB129Q9H1M3 183 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 PSTPIP2Q9H939 334 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 BIN2Q9UBW5 565 aaPredicted RBP20.27■□□□□ 0.84
RAB39A-201ENST00000320578 PCDHA1Q9Y5I3 950 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 PPP2R3BQ9Y5P8 575 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 DICER1Q9UPY3 1922 aaKnown RBP20.27■□□□□ 0.84
RAB39A-201ENST00000320578 RAD21O60216 631 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 SLFN14P0C7P3 912 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 ECE1P42892 770 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 IQCB1Q15051 598 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 IL17AQ16552 155 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 DCAF15Q66K64 600 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 DTHD1Q6ZMT9 781 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 CHURC1Q8WUH1 139 aa20.27■□□□□ 0.84
RAB39A-201ENST00000320578 STAT2P52630 851 aa20.26■□□□□ 0.83
RAB39A-201ENST00000320578 JAKMIP3Q5VZ66 844 aa20.26■□□□□ 0.83
RAB39A-201ENST00000320578 USP49Q70CQ1 688 aa20.26■□□□□ 0.83
RAB39A-201ENST00000320578 FAM160B2Q86V87 743 aa20.26■□□□□ 0.83
RAB39A-201ENST00000320578 EPSTI1Q96J88 318 aa20.26■□□□□ 0.83
RAB39A-201ENST00000320578 AK8Q96MA6 479 aa20.26■□□□□ 0.83
RAB39A-201ENST00000320578 PPP4R3AQ6IN85 833 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 SH3RF1Q7Z6J0 888 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 FBXO11Q86XK2 927 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
RAB39A-201ENST00000320578 SERTAD1Q9UHV2 236 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 ZNF112Q9UJU3 913 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 OR52Z1P0C646 297 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 AP3B2Q13367 1082 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 POSTNQ15063 836 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 IQUBQ8NA54 791 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 SPATA20Q8TB22 786 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 TMEM60Q9H2L4 133 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 PRR12Q9ULL5 1215 aa20.25■□□□□ 0.83
RAB39A-201ENST00000320578 NEMFO60524 1076 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 CCNT1O60563 726 aaKnown RBP20.24■□□□□ 0.83
RAB39A-201ENST00000320578 GCFC2P16383 781 aaKnown RBP20.24■□□□□ 0.83
RAB39A-201ENST00000320578 TXLNAP40222 546 aa20.24■□□□□ 0.83
RAB39A-201ENST00000320578 SARSP49591 514 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms