RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 KIF2AO00139 706 aaPredicted RBP14.82□□□□□ -0.04
CPNE1-201ENST00000317677 STXBP3O00186 592 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 KIF3CO14782 793 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 CUTAO60888 179 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 SLU7O95391 586 aaKnown RBP14.82□□□□□ -0.04
CPNE1-201ENST00000317677 PTPREP23469 700 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 NLRP5P59047 1200 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 ANO6Q4KMQ2 910 aa14.82□□□□□ -0.04
CPNE1-201ENST00000317677 DHX36Q9H2U1 1008 aaKnown RBP14.82□□□□□ -0.04
CPNE1-201ENST00000317677 CWC15Q9P013 229 aaKnown RBP14.82□□□□□ -0.04
CPNE1-201ENST00000317677 COL2A1P02458 1487 aaPredicted RBP14.81□□□□□ -0.04
CPNE1-201ENST00000317677 FRMPD2Q68DX3 1309 aaPredicted RBP14.81□□□□□ -0.04
CPNE1-201ENST00000317677 SPDYE2BA6NHP3 402 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 ZNF202O95125 648 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 SPDYE6P0CI01 402 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 JAG1P78504 1218 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 PLCB2Q00722 1185 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
CPNE1-201ENST00000317677 SPECC1Q5M775 1068 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 METTL16Q86W50 562 aaKnown RBP14.81□□□□□ -0.04
CPNE1-201ENST00000317677 PLA2G4DQ86XP0 818 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 UBXN6Q9BZV1 441 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 SH3GLB2Q9NR46 395 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 CLIP2Q9UDT6 1046 aa14.81□□□□□ -0.04
CPNE1-201ENST00000317677 MYO1CO00159 1063 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 CTAGE5O15320 804 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 CDC25BP30305 580 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 TATDN1Q6P1N9 297 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 JMYQ8N9B5 988 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 KRI1Q8N9T8 703 aaKnown RBP14.8□□□□□ -0.04
CPNE1-201ENST00000317677 RASGRP4Q8TDF6 673 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 TRERF1Q96PN7 1200 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 LZTS2Q9BRK4 669 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 UBA5Q9GZZ9 404 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 NMRK2Q9NPI5 230 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 ST7Q9NRC1 585 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 BARHL2Q9NY43 387 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 PI4KBQ9UBF8 816 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 ENTPD3O75355 529 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 TTLL1O95922 423 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 PLA2G4AP47712 749 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 GPS2Q13227 327 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 PIK3AP1Q6ZUJ8 805 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 SIAH1Q8IUQ4 282 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 BLIDQ8IZY5 108 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 DNAJC25Q9H1X3 360 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 RIOX1Q9H6W3 641 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 CBX8Q9HC52 389 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 ZNRF3Q9ULT6 936 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 PCDHA4Q9UN74 947 aa14.8□□□□□ -0.04
CPNE1-201ENST00000317677 CNTNAP1P78357 1384 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 CLRN2A0PK11 232 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 GLTPD2A6NH11 291 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 TRIM75PA6NK02 468 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 MPHOSPH10O00566 681 aaKnown RBP14.79□□□□□ -0.04
CPNE1-201ENST00000317677 TOMM70O94826 608 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 PRELPP51888 382 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 CXCL9Q07325 125 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 ELF2Q15723 593 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 SYT10Q6XYQ8 523 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 C11orf57Q6ZUT1 292 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-201ENST00000317677 HEATR3Q7Z4Q2 680 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 ZSCAN29Q8IWY8 852 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-201ENST00000317677 IQUBQ8NA54 791 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 PIGSQ96S52 555 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 VPS33BQ9H267 617 aa14.79□□□□□ -0.04
CPNE1-201ENST00000317677 SRPRBQ9Y5M8 271 aaKnown RBP14.79□□□□□ -0.04
CPNE1-201ENST00000317677 LOC102724159A0A0B4J2E5 919 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 SHTN1A0MZ66 631 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 ZRANB2O95218 330 aaKnown RBP eCLIP14.78□□□□□ -0.041e-6■■□□□ 12.9
CPNE1-201ENST00000317677 PNMA6AP0CW24 399 aaPredicted RBP14.78□□□□□ -0.04
CPNE1-201ENST00000317677 SMARCA1P28370 1054 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 SYKP43405 635 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 ZNF75DP51815 510 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 ZNF543Q08ER8 600 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 LRMPQ12912 555 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 PWP2Q15269 919 aaKnown RBP14.78□□□□□ -0.04
CPNE1-201ENST00000317677 PTPN14Q15678 1187 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 ZNF174Q15697 407 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 TTC38Q5R3I4 469 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 USP49Q70CQ1 688 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 LUZP1Q86V48 1076 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 DAGLBQ8NCG7 672 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 CCDC17Q96LX7 622 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 L2HGDHQ9H9P8 463 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 PSD3Q9NYI0 1048 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 ZNF70Q9UC06 446 aaPredicted RBP14.78□□□□□ -0.04
CPNE1-201ENST00000317677 TUBB4AP04350 444 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 CERKLQ49MI3 558 aaPredicted RBP14.78□□□□□ -0.04
CPNE1-201ENST00000317677 TTBK2Q6IQ55 1244 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 HOMER1Q86YM7 354 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 CDAN1Q8IWY9 1227 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 NIM1KQ8IY84 436 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 GOLGA6L1Q8N7Z2 621 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 RRAGCQ9HB90 399 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 VAT1LQ9HCJ6 419 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 PCDHA6Q9UN73 950 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 PCDHA8Q9Y5H6 950 aa14.78□□□□□ -0.04
CPNE1-201ENST00000317677 TCP10L2B9ZVM9 353 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms