RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 ZNF34Q8IZ26 560 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 ZNF654Q8IZM8 581 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 FERMT2Q96AC1 680 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 CCDC51Q96ER9 411 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 CAPZA3Q96KX2 299 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 GUCA1BQ9UMX6 200 aa21.18■□□□□ 0.98
HERPUD2-201ENST00000311350 TDO2P48775 406 aa21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 CTCFLQ8NI51 663 aaPredicted RBP21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 COG1Q8WTW3 980 aa21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 SAMM50Q9Y512 469 aa21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 TRIM75PA6NK02 468 aa21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 SHOX2O60902 331 aaPredicted RBP21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 CSRNP2Q9H175 543 aa21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 ITIH6Q6UXX5 1313 aa21.17■□□□□ 0.98
HERPUD2-201ENST00000311350 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 TGFB2P61812 414 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 CUL4BQ13620 913 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 NFIXQ14938 502 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 CDKAL1Q5VV42 579 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 GSDMAQ96QA5 445 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 SLC4A4Q9Y6R1 1079 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 MYCNP04198 464 aaPredicted RBP21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 MAP2K2P36507 400 aa21.16■□□□□ 0.98
HERPUD2-201ENST00000311350 NR5A1Q13285 461 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 SEC23AQ15436 765 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 ANKRD20A12PQ8NF67 263 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 FAM76AQ8TAV0 307 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 BCAS4Q8TDM0 211 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 CHP1Q99653 195 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 EBAG9O00559 213 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 ATP1A1P05023 1023 aaKnown RBP21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 AFMP43652 599 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 LCORLQ8N3X6 602 aa21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 PYM1Q9BRP8 204 aaKnown RBP21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 REXO2Q9Y3B8 237 aaKnown RBP21.15■□□□□ 0.98
HERPUD2-201ENST00000311350 TRAPPC11Q7Z392 1133 aa21.14■□□□□ 0.98
HERPUD2-201ENST00000311350 NUP98P52948 1817 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 SYNRGQ9UMZ2 1314 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 GOLGA6CA6NDK9 693 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 PRPF3O43395 683 aaKnown RBP21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 TUBBP07437 444 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 CCDC172P0C7W6 258 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 GOLGA6DP0CG33 693 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 KRT2P35908 639 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 PPARAQ07869 468 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 FILIP1LQ4L180 1135 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 UBAC1Q9BSL1 405 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 PHF20Q9BVI0 1012 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 SELENOOQ9BVL4 669 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 CABP5Q9NP86 173 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 ABHD10Q9NUJ1 306 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 RBM28Q9NW13 759 aaKnown RBP21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 GOLGA6AQ9NYA3 693 aa21.14■□□□□ 0.97
HERPUD2-201ENST00000311350 PCP11498 1178 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 CNGA4Q8IV77 575 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 ESR2Q92731 530 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 PAGE5Q96GU1 130 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 CRACR2AQ9BSW2 395 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 KIF13BQ9NQT8 1826 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 MYH8P13535 1937 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 DPYDQ12882 1025 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 RRP12Q5JTH9 1297 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 DZIP3Q86Y13 1208 aaKnown RBP21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 OXER1Q8TDS5 423 aa21.13■□□□□ 0.97
HERPUD2-201ENST00000311350 GRIN2DO15399 1336 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 A0A087X0B3 334 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 PRKAB2O43741 272 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 TMTC1Q8IUR5 882 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 MYO1FO00160 1098 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 CAMTA2O94983 1202 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 GNGT1P63211 74 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 FUT2Q10981 343 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 NUP88Q99567 741 aaPredicted RBP21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 VPS16Q9H269 839 aa21.12■□□□□ 0.97
HERPUD2-201ENST00000311350 ZNF185O15231 689 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 INPP5BP32019 993 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 MRPS25P82663 173 aaKnown RBP21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 PKN1Q16512 942 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 BICDL1Q6ZP65 573 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 CAPS2Q9BXY5 557 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 FAM107BQ9H098 131 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 CEP83Q9Y592 693 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 CALM1P0DP23 149 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 CALM2P0DP24 149 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 CALM3P0DP25 149 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 DPEP1P16444 411 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 TBC1D9BQ66K14 1250 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 RRP36Q96EU6 259 aaKnown RBP21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 POLD4Q9HCU8 107 aa21.11■□□□□ 0.97
HERPUD2-201ENST00000311350 PPP1R3GB7ZBB8 358 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 SERPINB2P05120 415 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 TRIM14Q14142 442 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 MAP9Q49MG5 647 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 TMED8Q6PL24 325 aaPredicted RBP21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 HELBQ8NG08 1087 aaPredicted RBP21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 ZKSCAN3Q9BRR0 538 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 MYO1AQ9UBC5 1043 aa21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 IQSEC3Q9UPP2 1182 aaPredicted RBP21.1■□□□□ 0.97
HERPUD2-201ENST00000311350 CAPN7Q9Y6W3 813 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms