RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 C7orf43Q8WVR3 580 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 STX8Q9UNK0 236 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
KDM2A-201ENST00000308783 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 CDK8P49336 464 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 CEP57Q86XR8 500 aa11.75□□□□□ -0.53
KDM2A-201ENST00000308783 ZNF396Q96N95 335 aaPredicted RBP11.75□□□□□ -0.53
KDM2A-201ENST00000308783 CHCHD3Q9NX63 227 aaKnown RBP11.75□□□□□ -0.53
KDM2A-201ENST00000308783 A0A1B0GVL5 298 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 ECE2O60344 883 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 CLCN6P51797 869 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 TRIM22Q8IYM9 498 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
KDM2A-201ENST00000308783 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
KDM2A-201ENST00000308783 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
KDM2A-201ENST00000308783 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
KDM2A-201ENST00000308783 EARS2Q5JPH6 523 aaKnown RBP11.74□□□□□ -0.53
KDM2A-201ENST00000308783 STYK1Q6J9G0 422 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
KDM2A-201ENST00000308783 NUP62CLQ9H1M0 184 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 RTEL1Q9NZ71 1219 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 NID2Q14112 1375 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 ZBTB7AO95365 584 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 GOLGA8HP0CJ92 632 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 TRIM29Q14134 588 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 STK38Q15208 465 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 ZNF444Q8N0Y2 327 aaPredicted RBP11.74□□□□□ -0.53
KDM2A-201ENST00000308783 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 MTA3Q9BTC8 594 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 FUCA2Q9BTY2 467 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 USP40Q9NVE5 1235 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 VPS18Q9P253 973 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 ODF2LQ9ULJ1 636 aa11.74□□□□□ -0.53
KDM2A-201ENST00000308783 KIF2AO00139 706 aaPredicted RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 MMP1P03956 469 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 BAG6P46379 1132 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 TCP10Q12799 353 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 SNW1Q13573 536 aaKnown RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 ARMC9Q7Z3E5 817 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 FBXO41Q8TF61 875 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 DEXIO95424 95 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 EIF6P56537 245 aaKnown RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 CDC42EP5Q6NZY7 148 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 PNMA1Q8ND90 353 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 STK36Q9NRP7 1315 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 DDX60LQ5H9U9 1706 aaKnown RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 ERCC3P19447 782 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 TOB1P50616 345 aaPredicted RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 SHROOM1Q2M3G4 852 aaPredicted RBP11.73□□□□□ -0.53
KDM2A-201ENST00000308783 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 CLIC6Q96NY7 704 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 TSPAN18Q96SJ8 248 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 EYA3Q99504 573 aa11.73□□□□□ -0.53
KDM2A-201ENST00000308783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.533e-6■■■■■ 64.1
KDM2A-201ENST00000308783 PCNTO95613 3336 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 YDJCA8MPS7 323 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 HNRNPH1P31943 449 aaKnown RBP11.72□□□□□ -0.53
KDM2A-201ENST00000308783 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
KDM2A-201ENST00000308783 PTPN14Q15678 1187 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 TMTC3Q6ZXV5 915 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 AMOTL1Q8IY63 956 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 FSIP1Q8NA03 581 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 SNED1Q8TER0 1413 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 WNT7AO00755 349 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 SPTLC2O15270 562 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 SLU7O95391 586 aaKnown RBP11.72□□□□□ -0.53
KDM2A-201ENST00000308783 NDUFA8P51970 172 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 SPECC1Q5M775 1068 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 KCNF1Q9H3M0 494 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 POLR3EQ9NVU0 708 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 ROBO3Q96MS0 1386 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 PPFIA2O75334 1257 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 KIF4AO95239 1232 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 SKILP12757 684 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 DPEP1P16444 411 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 KCNA3P22001 575 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 CRKP46108 304 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 DBN1Q16643 649 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 DACT2Q5SW24 774 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 C16orf86Q6ZW13 317 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 CCAR2Q8N163 923 aaKnown RBP11.72□□□□□ -0.53
KDM2A-201ENST00000308783 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 CEP95Q96GE4 821 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 MAP3K14Q99558 947 aa11.72□□□□□ -0.53
KDM2A-201ENST00000308783 TMEM47Q9BQJ4 181 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms