RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FLOT2Q14254 428 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 DIS3L2Q8IYB7 885 aaKnown RBP13.18□□□□□ -0.3
PCF11-201ENST00000298281 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
PCF11-201ENST00000298281 KRT87PA6NCN2 255 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
PCF11-201ENST00000298281 FANCCQ00597 558 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
PCF11-201ENST00000298281 KLHL30Q0D2K2 578 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 C16orf72Q14CZ0 275 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 SRPK1Q96SB4 655 aaKnown RBP13.18□□□□□ -0.3
PCF11-201ENST00000298281 MROH5Q6ZUA9 1318 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 GPAA1O43292 621 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 DAB2P98082 770 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 MYCT1Q8N699 235 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 PEX26Q7Z412 305 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 MRPL44Q9H9J2 332 aaKnown RBP13.18□□□□□ -0.3
PCF11-201ENST00000298281 RIC8AQ9NPQ8 531 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 HACD3Q9P035 362 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 SCOCQ9UIL1 159 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
PCF11-201ENST00000298281 POLR2BP30876 1174 aaKnown RBP13.17□□□□□ -0.3
PCF11-201ENST00000298281 DNAJC7Q99615 494 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
PCF11-201ENST00000298281 NLRP12P59046 1061 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 SFMBT2Q5VUG0 894 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 TEX12Q9BXU0 123 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 PPP1R9AQ9ULJ8 1098 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 SLC27A2O14975 620 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 PFDN1O60925 122 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 EEF1DP29692 281 aaKnown RBP13.17□□□□□ -0.3
PCF11-201ENST00000298281 INPP5BP32019 993 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 GDAP1Q8TB36 358 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 ZFYVE19Q96K21 471 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 EVI5O60447 810 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 GLE1Q53GS7 698 aaKnown RBP13.17□□□□□ -0.3
PCF11-201ENST00000298281 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 GEMIN8Q9NWZ8 242 aaKnown RBP13.17□□□□□ -0.3
PCF11-201ENST00000298281 PARD3Q8TEW0 1356 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 H0YIN7 160 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
PCF11-201ENST00000298281 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
PCF11-201ENST00000298281 KBTBD3Q8NAB2 608 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 YIPF2Q9BWQ6 316 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 FIS1Q9Y3D6 152 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 ZNF202O95125 648 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 GNPTABQ3T906 1256 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 BBOF1Q8ND07 529 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 CHURC1Q8WUH1 139 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 MAP10Q9P2G4 905 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
PCF11-201ENST00000298281 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCF11-201ENST00000298281 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 FBXL13Q8NEE6 735 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 GLG1Q92896 1179 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 ZNF653Q96CK0 615 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 MYH10P35580 1976 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 CEP104O60308 925 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 STAM2O75886 525 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 POSTNQ15063 836 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 MAD1L1Q9Y6D9 718 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 KDM2BQ8NHM5 1336 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
PCF11-201ENST00000298281 IFNA8P32881 189 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 GARSP41250 739 aaKnown RBP13.16□□□□□ -0.3
PCF11-201ENST00000298281 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 NLRX1Q86UT6 975 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 DRC3Q9H069 523 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 BNIP3LO60238 219 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 KAZNQ674X7 775 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 DPP8Q6V1X1 898 aaPredicted RBP13.16□□□□□ -0.3
PCF11-201ENST00000298281 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 RNF40O75150 1001 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 NRBF2Q96F24 287 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
PCF11-201ENST00000298281 ESRRBO95718 433 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 XAGE2Q96GT9 111 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 POLIQ9UNA4 740 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
PCF11-201ENST00000298281 BRD1O95696 1058 aa13.15□□□□□ -0.3
PCF11-201ENST00000298281 LMNAP02545 664 aaKnown RBP13.15□□□□□ -0.3
PCF11-201ENST00000298281 VCPP55072 806 aaKnown RBP13.15□□□□□ -0.3
PCF11-201ENST00000298281 TRMT10CQ7L0Y3 403 aaKnown RBP13.15□□□□□ -0.3
PCF11-201ENST00000298281 TEKT4Q8WW24 435 aa13.15□□□□□ -0.3
PCF11-201ENST00000298281 ALDH1B1P30837 517 aa13.15□□□□□ -0.3
PCF11-201ENST00000298281 BEND3Q5T5X7 828 aa13.15□□□□□ -0.3
PCF11-201ENST00000298281 ANKRD42Q8N9B4 389 aa13.15□□□□□ -0.3
PCF11-201ENST00000298281 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCF11-201ENST00000298281 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
PCF11-201ENST00000298281 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
PCF11-201ENST00000298281 GRK7Q8WTQ7 553 aa13.15□□□□□ -0.3
PCF11-201ENST00000298281 SNX19Q92543 992 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms