RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SPATA1Q5VX52 437 aa19.03■□□□□ 0.64
CDCP1-201ENST00000296129 GADL1Q6ZQY3 521 aa19.03■□□□□ 0.64
CDCP1-201ENST00000296129 BRINP3Q76B58 766 aa19.03■□□□□ 0.64
CDCP1-201ENST00000296129 PPM1EQ8WY54 764 aa19.03■□□□□ 0.64
CDCP1-201ENST00000296129 IWS1Q96ST2 819 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 NDC80O14777 642 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 TTLL1O95922 423 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 SNX16P57768 344 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 SMC6Q96SB8 1091 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 QRICH2Q9H0J4 1663 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 CEP128Q6ZU80 1094 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 METTL13Q8N6R0 699 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 H7C1W4 665 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 CSRNP1Q96S65 589 aa19.02■□□□□ 0.64
CDCP1-201ENST00000296129 PALLDQ8WX93 1383 aa19.02■□□□□ 0.63
CDCP1-201ENST00000296129 CYP27B1O15528 508 aa19.02■□□□□ 0.63
CDCP1-201ENST00000296129 FTOQ9C0B1 505 aaKnown RBP eCLIP19.02■□□□□ 0.63
CDCP1-201ENST00000296129 POLR3EQ9NVU0 708 aa19.02■□□□□ 0.63
CDCP1-201ENST00000296129 GAS8O95995 478 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 CUL4AQ13619 759 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 RASGRF1Q13972 1273 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 ARMCX3Q9UH62 379 aaPredicted RBP19.01■□□□□ 0.63
CDCP1-201ENST00000296129 KIF23Q02241 960 aaPredicted RBP19.01■□□□□ 0.63
CDCP1-201ENST00000296129 CYP4A11Q02928 519 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 LRRC8AQ8IWT6 810 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 TRPC6Q9Y210 931 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 PPP2R2CQ9Y2T4 447 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 CYP2D7A0A087X1C5 515 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.01■□□□□ 0.63
CDCP1-201ENST00000296129 STAT1P42224 750 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 LIG4P49917 911 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 HLFQ16534 295 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 PGBD1Q96JS3 809 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 PLEKHA4Q9H4M7 779 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 SPATA31A3Q5VYP0 1347 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 BBOX1O75936 387 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 FAM178BQ8IXR5 827 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 KCNG1Q9UIX4 513 aa19.01■□□□□ 0.63
CDCP1-201ENST00000296129 VIMP08670 466 aaKnown RBP19■□□□□ 0.63
CDCP1-201ENST00000296129 USP17L8P0C7I0 530 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 ABCB4P21439 1286 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 MRFAP1L1Q96HT8 127 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 CROCC2H7BZ55 1655 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 GDF11O95390 407 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 GAS2L3Q86XJ1 694 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 CCDC105Q8IYK2 499 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 CCDC17Q96LX7 622 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 AMNQ9BXJ7 453 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 KIAA1024Q9UPX6 916 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 MECOMQ03112 1051 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 ARHGAP27Q6ZUM4 889 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 TMC4Q7Z404 712 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 DYNLL2Q96FJ2 89 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 ADGRL3Q9HAR2 1447 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 MMP1P03956 469 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 SLC16A2P36021 539 aa19■□□□□ 0.63
CDCP1-201ENST00000296129 GPATCH4Q5T3I0 446 aaKnown RBP19■□□□□ 0.63
CDCP1-201ENST00000296129 ADAM9Q13443 819 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 FAM26FQ5R3K3 315 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 GBP6Q6ZN66 633 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 PIGSQ96S52 555 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 TRIM7Q9C029 511 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 ZSWIM5Q9P217 1185 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 COL4A3BPQ9Y5P4 624 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 SAR1BQ9Y6B6 198 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 LAD1O00515 517 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 POLR2FP61218 127 aaKnown RBP18.99■□□□□ 0.63
CDCP1-201ENST00000296129 UBXN2AP68543 259 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 SETDB1Q15047 1291 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 M0QZ92 97 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 TRAPPC10P48553 1259 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 PAK2Q13177 524 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 CFAP157Q5JU67 520 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 NCAPG2Q86XI2 1143 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 ANKRD35Q8N283 1001 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 GOLGA5Q8TBA6 731 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 PCDHA5Q9Y5H7 936 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 LONRF2Q1L5Z9 754 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 EPHA10Q5JZY3 1008 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 KRT26Q7Z3Y9 468 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 AXIN2Q9Y2T1 843 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 AMFRQ9UKV5 643 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 RABGAP1Q9Y3P9 1069 aa18.99■□□□□ 0.63
CDCP1-201ENST00000296129 BUB1O43683 1085 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 GOLGA6BA6NDN3 693 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 KRT27Q7Z3Y8 459 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 GPR101Q96P66 508 aaPredicted RBP18.98■□□□□ 0.63
CDCP1-201ENST00000296129 MADDQ8WXG6 1647 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 STK10O94804 968 aaKnown RBP18.98■□□□□ 0.63
CDCP1-201ENST00000296129 FOSP01100 380 aaPredicted RBP18.98■□□□□ 0.63
CDCP1-201ENST00000296129 MCAMP43121 646 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 NECTIN1Q15223 517 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 CLUL1Q15846 466 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 CCDC117Q8IWD4 279 aaPredicted RBP18.98■□□□□ 0.63
CDCP1-201ENST00000296129 IGKV5-2P06315 115 aa18.98■□□□□ 0.63
CDCP1-201ENST00000296129 ALDH3A1P30838 453 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms