RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 FERMT2Q96AC1 680 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 CABP5Q9NP86 173 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 ARFGEF1Q9Y6D6 1849 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 MROH7-TTC4A0A0A0MT08 1334 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 PITPNM2Q9BZ72 1349 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 ARHGAP6O43182 974 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 PRDX5P30044 214 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 NAA25Q14CX7 972 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 KCNQ5Q9NR82 932 aa13.22□□□□□ -0.29
SYNGAP1-201ENST00000293748 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 PPP1R9BQ96SB3 815 aa13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 LMBRD1Q9NUN5 540 aa13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 RNF113AO15541 343 aaKnown RBP13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 MECOMQ03112 1051 aa13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 FMNL3Q8IVF7 1028 aa13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 ZNF70Q9UC06 446 aaPredicted RBP13.21□□□□□ -0.29
SYNGAP1-201ENST00000293748 TLDC2A0PJX2 215 aa13.21□□□□□ -0.3
SYNGAP1-201ENST00000293748 ARHGAP25P42331 645 aa13.21□□□□□ -0.3
SYNGAP1-201ENST00000293748 TRAF1Q13077 416 aa13.21□□□□□ -0.3
SYNGAP1-201ENST00000293748 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.3
SYNGAP1-201ENST00000293748 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.3
SYNGAP1-201ENST00000293748 KBTBD3Q8NAB2 608 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 ZDHHC15Q96MV8 337 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 CBX8Q9HC52 389 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 VAT1LQ9HCJ6 419 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 PICK1Q9NRD5 415 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 APLP1P51693 650 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 APOBRQ0VD83 1088 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 DIXDC1Q155Q3 683 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 DHX36Q9H2U1 1008 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 A0A1B0GVL5 298 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 GOLGA6CA6NDK9 693 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 GOLGA6DP0CG33 693 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 TRPM4Q8TD43 1214 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 GBA2Q9HCG7 927 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 GOLGA6AQ9NYA3 693 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
SYNGAP1-201ENST00000293748 WNT10BO00744 389 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 ALDH3A1P30838 453 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 TCP10Q12799 353 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 DLEC1Q9Y238 1755 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 CCDC160A6NGH7 325 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 FKBP1BP68106 108 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 FANCCQ00597 558 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 PRKG1Q13976 671 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 UBE3CQ15386 1083 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 DAGLAQ9Y4D2 1042 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 TMEM88BA6NKF7 163 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 PDE6AP16499 860 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 APPBP2Q92624 585 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
SYNGAP1-201ENST00000293748 ENTPD3O75355 529 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 FKBP1CQ5VVH2 108 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 CROCCP2Q86T23 111 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 CACNA1SQ13698 1873 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 TRIM7Q9C029 511 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 ATP5DP30049 168 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 KRT2P35908 639 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 RASA3Q14644 834 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 C8orf74Q6P047 294 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 INTS8Q75QN2 995 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 PPFIA1Q13136 1202 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 SLC10A4Q96EP9 437 aa13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-201ENST00000293748 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 HUNKP57058 714 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 LRRC45Q96CN5 670 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 RPS6KB1P23443 525 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 PRELPP51888 382 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 ARID5AQ03989 594 aa13.17□□□□□ -0.3
SYNGAP1-201ENST00000293748 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms