RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TAOK1Q7L7X3 1001 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 CCDC127Q96BQ5 260 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 TLR7Q9NYK1 1049 aaKnown RBP19.03■□□□□ 0.64
SHANK1-201ENST00000293441 PIK3CAP42336 1068 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 PLEKHG1Q9ULL1 1385 aa19.03■□□□□ 0.64
SHANK1-201ENST00000293441 BTBD18B2RXH4 712 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 PTPROQ16827 1216 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 HHATQ5VTY9 493 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 SEPT10Q9P0V9 454 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 ARHGAP6O43182 974 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 SRGAP1Q7Z6B7 1085 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 GOLGA5Q8TBA6 731 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 VPS37BQ9H9H4 285 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 PALD1Q9ULE6 856 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 C17orf53Q8N3J3 647 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-201ENST00000293441 STMN2Q93045 179 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 USP28Q96RU2 1077 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 RAB20Q9NX57 234 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 AKT3Q9Y243 479 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 SLC12A2P55011 1212 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 POMGNT1Q8WZA1 660 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 XPO4Q9C0E2 1151 aaKnown RBP19.02■□□□□ 0.64
SHANK1-201ENST00000293441 ZSWIM6Q9HCJ5 1215 aa19.02■□□□□ 0.64
SHANK1-201ENST00000293441 ATP10DQ9P241 1426 aa19.02■□□□□ 0.63
SHANK1-201ENST00000293441 CIAO1O76071 339 aa19.02■□□□□ 0.63
SHANK1-201ENST00000293441 PDE6CP51160 858 aa19.02■□□□□ 0.63
SHANK1-201ENST00000293441 MKRN3Q13064 507 aaKnown RBP19.02■□□□□ 0.63
SHANK1-201ENST00000293441 CEP85LQ5SZL2 805 aa19.02■□□□□ 0.63
SHANK1-201ENST00000293441 RPS6KC1Q96S38 1066 aa19.02■□□□□ 0.63
SHANK1-201ENST00000293441 ARMCX3Q9UH62 379 aaPredicted RBP19.02■□□□□ 0.63
SHANK1-201ENST00000293441 TSKSQ9UJT2 592 aa19.02■□□□□ 0.63
SHANK1-201ENST00000293441 TTLL1O95922 423 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 UBE3CQ15386 1083 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 GBP6Q6ZN66 633 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 MAIP1Q8WWC4 291 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 H0YCG3 227 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 PTGDRQ13258 359 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 CUL4BQ13620 913 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 LRCH2Q5VUJ6 765 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 RABGAP1Q9Y3P9 1069 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 SPDYE16A6NNV3 312 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-201ENST00000293441 KRT15P19012 456 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 SPDYE2Q495Y8 402 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 TBC1D10BQ4KMP7 808 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-201ENST00000293441 LGSNQ5TDP6 509 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 COL4A3BPQ9Y5P4 624 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 Q3C1V9 767 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.01■□□□□ 0.63
SHANK1-201ENST00000293441 SYNJ2BP-COX16A0A087WUM0 186 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 PPM1KQ8N3J5 372 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 COX16Q9P0S2 106 aa19.01■□□□□ 0.63
SHANK1-201ENST00000293441 RPN1P04843 607 aaKnown RBP19■□□□□ 0.63
SHANK1-201ENST00000293441 GKAP1Q5VSY0 366 aaPredicted RBP19■□□□□ 0.63
SHANK1-201ENST00000293441 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 SYMPKQ92797 1274 aaKnown RBP19■□□□□ 0.63
SHANK1-201ENST00000293441 EPSTI1Q96J88 318 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 ZNF577Q9BSK1 485 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 KIAA1468Q9P260 1216 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 PNMA2Q9UL42 364 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 CLIC4Q9Y696 253 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 N4BP1O75113 896 aaKnown RBP19■□□□□ 0.63
SHANK1-201ENST00000293441 CSPG5O95196 566 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 SLC16A2P36021 539 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 CCNA1P78396 465 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 AMNQ9BXJ7 453 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 KIF1BO60333 1816 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 NOL3O60936 208 aaKnown RBP19■□□□□ 0.63
SHANK1-201ENST00000293441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19■□□□□ 0.63
SHANK1-201ENST00000293441 ZNF827Q17R98 1081 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 LMBRD1Q9NUN5 540 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 HESX1Q9UBX0 185 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 KIAA1024Q9UPX6 916 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 ZNF710Q8N1W2 664 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 CCDC17Q96LX7 622 aa19■□□□□ 0.63
SHANK1-201ENST00000293441 PCP11498 1178 aaKnown RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 ZNF131P52739 623 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 LACTBP83111 547 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 SCRN1Q12765 414 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 SUPT20HL1Q3ZLR7 823 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 ASPRV1Q53RT3 343 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 GOLGA6BA6NDN3 693 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 PDIA3P30101 505 aaKnown RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 POLR2FP61218 127 aaKnown RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 HADHQ16836 314 aaKnown RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 AP5M1Q9H0R1 490 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 IFNB1P01574 187 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 ADAM9Q13443 819 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 ARMC9Q7Z3E5 817 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 RABEP2Q9H5N1 569 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 LARSQ9P2J5 1176 aaKnown RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 DBNLQ9UJU6 430 aaKnown RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 TLR3O15455 904 aaKnown RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 BUB1O43683 1085 aa18.99■□□□□ 0.63
SHANK1-201ENST00000293441 SDCCAG8Q86SQ7 713 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-201ENST00000293441 USP14P54578 494 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms