RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 PDLIM7Q9NR12 457 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 RNF146Q9NTX7 359 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 ZMYM6O95789 1325 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 SYNRGQ9UMZ2 1314 aa20.51■□□□□ 0.87
TFF3-201ENST00000291525 A0A0D9SFI3 127 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 A0A1W2PQ45 241 aaPredicted RBP20.5■□□□□ 0.87
TFF3-201ENST00000291525 A0A1W2PQY0 241 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 POTEB2H3BUK9 544 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 ADAMTS4O75173 837 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 DUSP11O75319 330 aaKnown RBP20.5■□□□□ 0.87
TFF3-201ENST00000291525 KCTD1Q719H9 257 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 ARMCX2Q7L311 632 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 DCAF4Q8WV16 495 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 FAM227BQ96M60 508 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
TFF3-201ENST00000291525 IL17RBQ9NRM6 502 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 TACC3Q9Y6A5 838 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 LAMA3Q16787 3333 aa20.5■□□□□ 0.87
TFF3-201ENST00000291525 NMT2O60551 498 aa20.49■□□□□ 0.87
TFF3-201ENST00000291525 FGRP09769 529 aa20.49■□□□□ 0.87
TFF3-201ENST00000291525 PCP11498 1178 aaKnown RBP20.49■□□□□ 0.87
TFF3-201ENST00000291525 TLE2Q04725 743 aa20.49■□□□□ 0.87
TFF3-201ENST00000291525 CCDC96Q2M329 555 aa20.49■□□□□ 0.87
TFF3-201ENST00000291525 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
TFF3-201ENST00000291525 RILPL2Q969X0 211 aa20.49■□□□□ 0.87
TFF3-201ENST00000291525 LENG1Q96BZ8 264 aaPredicted RBP20.49■□□□□ 0.87
TFF3-201ENST00000291525 STARD7Q9NQZ5 370 aa20.49■□□□□ 0.87
TFF3-201ENST00000291525 CCDC171Q6TFL3 1326 aa20.49■□□□□ 0.87
TFF3-201ENST00000291525 ASB14A6NK59 587 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 FGAP02671 866 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 CLTBP09497 229 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 HSPD1P10809 573 aaKnown RBP20.48■□□□□ 0.87
TFF3-201ENST00000291525 ALAS1P13196 640 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 NOVP48745 357 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 ACLYP53396 1101 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 NMIQ13287 307 aaPredicted RBP20.48■□□□□ 0.87
TFF3-201ENST00000291525 SMC5Q8IY18 1101 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 PCSK9Q8NBP7 692 aaKnown RBP20.48■□□□□ 0.87
TFF3-201ENST00000291525 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 AGBL1Q96MI9 1066 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 TRERF1Q96PN7 1200 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 MTMR7Q9Y216 660 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 ZNF536O15090 1300 aa20.48■□□□□ 0.87
TFF3-201ENST00000291525 TOP1P11387 765 aaKnown RBP20.47■□□□□ 0.87
TFF3-201ENST00000291525 CST5P28325 142 aaPredicted RBP20.47■□□□□ 0.87
TFF3-201ENST00000291525 CCDC144BQ3MJ40 725 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 CCDC174Q6PII3 467 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 CCDC144CPQ8IYA2 1237 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 FAM133AQ8N9E0 248 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 KLHDC9Q8NEP7 349 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 BADQ92934 168 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 FGD4Q96M96 766 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 A1CFQ9NQ94 594 aaKnown RBP20.47■□□□□ 0.87
TFF3-201ENST00000291525 TCP11L1Q9NUJ3 509 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 PRR12Q9ULL5 1215 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 MROH7Q68CQ1 1323 aa20.47■□□□□ 0.87
TFF3-201ENST00000291525 DCDC2CA8MYV0 355 aa20.46■□□□□ 0.87
TFF3-201ENST00000291525 PQBP1O60828 265 aaKnown RBP20.46■□□□□ 0.87
TFF3-201ENST00000291525 C6orf222P0C671 652 aaPredicted RBP20.46■□□□□ 0.87
TFF3-201ENST00000291525 KCNA10Q16322 511 aa20.46■□□□□ 0.87
TFF3-201ENST00000291525 B4GALNT3Q6L9W6 998 aa20.46■□□□□ 0.87
TFF3-201ENST00000291525 CHD1LQ86WJ1 897 aa20.46■□□□□ 0.87
TFF3-201ENST00000291525 GLT1D1Q96MS3 346 aa20.46■□□□□ 0.87
TFF3-201ENST00000291525 TOX2Q96NM4 488 aa20.46■□□□□ 0.87
TFF3-201ENST00000291525 RNF41Q9H4P4 317 aaPredicted RBP20.46■□□□□ 0.87
TFF3-201ENST00000291525 CCPG1Q9ULG6 757 aa20.46■□□□□ 0.87
TFF3-201ENST00000291525 TRIM43BA6NCK2 446 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 CNTN2Q02246 1040 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 FAM109BQ6ICB4 259 aaPredicted RBP20.45■□□□□ 0.86
TFF3-201ENST00000291525 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 Q7L0L9 218 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 ANKRD33Q7Z3H0 272 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 SH3RF1Q7Z6J0 888 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
TFF3-201ENST00000291525 TRIM43Q96BQ3 446 aaPredicted RBP20.45■□□□□ 0.86
TFF3-201ENST00000291525 UPF3AQ9H1J1 476 aaKnown RBP20.45■□□□□ 0.86
TFF3-201ENST00000291525 MTMR10Q9NXD2 777 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 PNMA2Q9UL42 364 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 ELP1O95163 1332 aa20.45■□□□□ 0.86
TFF3-201ENST00000291525 ICAM1P05362 532 aa20.44■□□□□ 0.86
TFF3-201ENST00000291525 RAG1P15918 1043 aa20.44■□□□□ 0.86
TFF3-201ENST00000291525 NT5C2P49902 561 aa20.44■□□□□ 0.86
TFF3-201ENST00000291525 GJA9P57773 515 aa20.44■□□□□ 0.86
TFF3-201ENST00000291525 AKNAD1Q5T1N1 836 aa20.44■□□□□ 0.86
TFF3-201ENST00000291525 OSBPL3Q9H4L5 887 aa20.44■□□□□ 0.86
TFF3-201ENST00000291525 TMEM39AQ9NV64 488 aa20.44■□□□□ 0.86
TFF3-201ENST00000291525 HIP1O00291 1037 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 KIAA0355O15063 1070 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 SDSP20132 328 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 HAND2P61296 217 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 SHHQ15465 462 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 SYDE2Q5VT97 1194 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 CCSAPQ6IQ19 270 aaPredicted RBP20.43■□□□□ 0.86
TFF3-201ENST00000291525 BTNL9Q6UXG8 535 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 NOL8Q76FK4 1167 aaKnown RBP20.43■□□□□ 0.86
TFF3-201ENST00000291525 SLC17A8Q8NDX2 589 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 VTI1AQ96AJ9 217 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 TTC14Q96N46 770 aa20.43■□□□□ 0.86
TFF3-201ENST00000291525 TMEM47Q9BQJ4 181 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms