RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CASP8Q14790 479 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 NAA35Q5VZE5 725 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 KLHL14Q9P2G3 628 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 PARP2Q9UGN5 583 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 ARMCX3Q9UH62 379 aaPredicted RBP18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 ANKRD65E5RJM6 399 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 RBL2Q08999 1139 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 TEX2Q8IWB9 1127 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 ANKRD7Q92527 254 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 NAA30Q147X3 362 aaPredicted RBP18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 RASIP1Q5U651 963 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 SRLQ86TD4 932 aa18.09■□□□□ 0.49
SH3RF1-201ENST00000284637 SIRT2Q8IXJ6 389 aa18.08■□□□□ 0.49
SH3RF1-201ENST00000284637 CPXCR1Q8N123 301 aa18.08■□□□□ 0.49
SH3RF1-201ENST00000284637 GGA1Q9UJY5 639 aa18.08■□□□□ 0.49
SH3RF1-201ENST00000284637 GOLGA8HP0CJ92 632 aa18.08■□□□□ 0.49
SH3RF1-201ENST00000284637 SCG2P13521 617 aa18.08■□□□□ 0.49
SH3RF1-201ENST00000284637 GRAMD1CQ8IYS0 662 aa18.08■□□□□ 0.49
SH3RF1-201ENST00000284637 SH2D4AQ9H788 454 aa18.08■□□□□ 0.49
SH3RF1-201ENST00000284637 CTTNBP2Q8WZ74 1663 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 RASSF7Q02833 373 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 TCP10Q12799 353 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 CASC4Q6P4E1 433 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 RBM17Q96I25 401 aaKnown RBP18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 RILPQ96NA2 401 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 CARMIL3Q8ND23 1372 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 GYS2P54840 703 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 SNX16P57768 344 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 CC2D1AQ6P1N0 951 aaPredicted RBP18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 CAPN12Q6ZSI9 719 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 SAAL1Q96ER3 474 aa18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 ZBTB12Q9Y330 459 aaPredicted RBP18.08■□□□□ 0.48
SH3RF1-201ENST00000284637 TRAPPC3LQ5T215 181 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 CTAGE3PQ8IX95 158 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 ARHGEF10LQ9HCE6 1279 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 KIAA0556O60303 1618 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 OR52Z1P0C646 297 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 LRRC23Q53EV4 343 aaPredicted RBP18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 PNMA1Q8ND90 353 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 PRDM4Q9UKN5 801 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 GMNNO75496 209 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 PHLDB3Q6NSJ2 640 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 KRT12Q99456 494 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 TUBGCP2Q9BSJ2 902 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 IKBKBO14920 756 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 BCAMP50895 628 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 DBN1Q16643 649 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 POLR3EQ9NVU0 708 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 PFDN1O60925 122 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 ADCY8P40145 1251 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 LGSNQ5TDP6 509 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 CCDC89Q8N998 374 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 CXorf56Q9H5V9 222 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 RCOR1Q9UKL0 485 aa18.07■□□□□ 0.48
SH3RF1-201ENST00000284637 H2AFZP0C0S5 128 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 GYG1P46976 350 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 CTSWP56202 376 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 H2AFVQ71UI9 128 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 SLC24A3Q9HC58 644 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 ARPP21Q9UBL0 812 aaPredicted RBP18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 PCDHA12Q9UN75 941 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 GUCY2CP25092 1073 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 LINC00301Q8NCQ3 95 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 LARSQ9P2J5 1176 aaKnown RBP18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 STK24Q9Y6E0 443 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 DAPK3O43293 454 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 GSDMAQ96QA5 445 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 GINS2Q9Y248 185 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 CNOT6LQ96LI5 555 aaKnown RBP18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 VCX3AQ9NNX9 186 aa18.06■□□□□ 0.48
SH3RF1-201ENST00000284637 ADGRL2O95490 1459 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 BIRC2Q13490 618 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 ARMC9Q7Z3E5 817 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 CCDC13Q8IYE1 715 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 ACRBPQ8NEB7 543 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 VTI1AQ96AJ9 217 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 PANK4Q9NVE7 773 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 SLMAPQ14BN4 828 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 NEK8Q86SG6 692 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 CEP120Q8N960 986 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 MAIP1Q8WWC4 291 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 TCP11Q8WWU5 503 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 PUS3Q9BZE2 481 aaKnown RBP18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 COPRSQ9NQ92 184 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 PPP6R2O75170 966 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 CRCPO75575 148 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 TROVE2P10155 538 aaKnown RBP eCLIP18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 TNNI1P19237 187 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 ADORA1P30542 326 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 IFNAR2P48551 515 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 ADAM9Q13443 819 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 ARID5BQ14865 1188 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 ZCCHC17Q9NP64 241 aaKnown RBP18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 PARP3Q9Y6F1 533 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 SOWAHDA6NJG2 315 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 KLRF2D3W0D1 207 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms