RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 FAM204AQ9H8W3 233 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MYH2Q9UKX2 1941 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 AKR1B15C9JRZ8 316 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SLURP2P0DP57 97 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SEC23AQ15436 765 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 DNAJC21Q5F1R6 531 aaKnown RBP17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 JMYQ8N9B5 988 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 FAM71BQ8TC56 605 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SH3RF3Q8TEJ3 882 aaPredicted RBP17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 KAT2BQ92831 832 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.462e-8■■■■■ 29.6
MAP1LC3B-201ENST00000268607 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MAN1B1Q9UKM7 699 aa17.95■□□□□ 0.46
MAP1LC3B-201ENST00000268607 KCNA3P22001 575 aa17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MNAT1P51948 309 aa17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ZSCAN10Q96SZ4 725 aaPredicted RBP17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 A0A087WUV0 522 aaPredicted RBP17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 PPFIA4O75335 1185 aa17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 GRIN1Q05586 938 aa17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 IFIT1BQ5T764 474 aaKnown RBP17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 NOSTRINQ8IVI9 506 aa17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MSL3Q8N5Y2 521 aaKnown RBP17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SAP30BPQ9UHR5 308 aaKnown RBP17.94■□□□□ 0.46
MAP1LC3B-201ENST00000268607 TEX33O43247 280 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 PLEKHA8P1O95397 391 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MMP1P03956 469 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 USP17L8P0C7I0 530 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 TOB1P50616 345 aaPredicted RBP17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SLC35F6Q8N357 371 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 TMTC2Q8N394 836 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 FAM212AQ96EL1 285 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 DCP1AQ9NPI6 582 aaPredicted RBP17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 VPS54Q9P1Q0 977 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ABL1P00519 1130 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 RBL2Q08999 1139 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 NR1I3Q14994 352 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SAFBQ15424 915 aaKnown RBP eCLIP17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SHISA4Q96DD7 197 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MED15Q96RN5 788 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ANAPC4Q9UJX5 808 aa17.93■□□□□ 0.46
MAP1LC3B-201ENST00000268607 FAM237AA0A1B0GTK4 181 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CTAGE9A4FU28 777 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 FAM205CA6NFA0 338 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 IL1R1P14778 569 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 LIG3P49916 1009 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MDM2Q00987 491 aaPredicted RBP17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 KIAA0825Q8IV33 1275 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 TGFBRAP1Q8WUH2 860 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 V9GY48 417 aaPredicted RBP17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 SEMA3EO15041 775 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MAPKAPK5Q8IW41 473 aa17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 NOA1Q8NC60 698 aaKnown RBP17.92■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CTAGE15A4D2H0 777 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ERLIN2O94905 339 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 DEXIO95424 95 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CTAGE8P0CG41 777 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CTAGE6Q86UF2 777 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CTAGE4Q8IX94 777 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 GRAMD1CQ8IYS0 662 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ENOX1Q8TC92 643 aaKnown RBP17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 PANX2Q96RD6 677 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 PCDHB6Q9Y5E3 794 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 STK36Q9NRP7 1315 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CACNB3P54284 484 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 IQCA1Q86XH1 822 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 WASF1Q92558 559 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 DUOX1Q9NRD9 1551 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MCM9Q9NXL9 1143 aa17.91■□□□□ 0.46
MAP1LC3B-201ENST00000268607 RNF40O75150 1001 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 AKAP17AQ02040 695 aaKnown RBP17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 POSTNQ15063 836 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 C7orf43Q8WVR3 580 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 DYNLL2Q96FJ2 89 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CRNKL1Q9BZJ0 848 aaKnown RBP17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 FBXW10Q5XX13 1052 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 CATIPQ7Z7H3 387 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 PPFIBP1Q86W92 1011 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 TTLL6Q8N841 843 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 IGSF22Q8N9C0 903 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 ACRBPQ8NEB7 543 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 GBP3Q9H0R5 595 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 MTMR7Q9Y216 660 aa17.9■□□□□ 0.46
MAP1LC3B-201ENST00000268607 HNRNPH1P31943 449 aaKnown RBP17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 BTDP43251 543 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 PICALMQ13492 652 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 CNKSR1Q969H4 720 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 MED4Q9NPJ6 270 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TTF2Q9UNY4 1162 aaKnown RBP17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 A0A1B0GTH6 734 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 EARS2Q5JPH6 523 aaKnown RBP17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 STYK1Q6J9G0 422 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 MLKLQ8NB16 471 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms