RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 GCFC2P16383 781 aaKnown RBP18.03■□□□□ 0.48
GPC1-201ENST00000264039 ADCY1Q08828 1119 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 SOGA3Q5TF21 947 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 EMBQ6PCB8 327 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 MAEAQ7L5Y9 396 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 AP1M1Q9BXS5 423 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 TSGA10Q9BZW7 698 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 RBM12Q9NTZ6 932 aaKnown RBP18.03■□□□□ 0.48
GPC1-201ENST00000264039 SH2B2O14492 632 aaPredicted RBP18.03■□□□□ 0.48
GPC1-201ENST00000264039 TCERG1LQ5VWI1 586 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 ALS2CLQ60I27 953 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 TTLL7Q6ZT98 887 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 CALR3Q96L12 384 aaKnown RBP18.03■□□□□ 0.48
GPC1-201ENST00000264039 OSBPL9Q96SU4 736 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 VAT1LQ9HCJ6 419 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 PTPRMP28827 1452 aa18.03■□□□□ 0.48
GPC1-201ENST00000264039 OPLAHO14841 1288 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 UBE4AQ14139 1066 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 DYMQ7RTS9 669 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 MYCBPAPQ8TBZ2 947 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 RASGRP4Q8TDF6 673 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 KCNK9Q9NPC2 374 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 KRT18P05783 430 aaKnown RBP18.02■□□□□ 0.48
GPC1-201ENST00000264039 SLCO1A2P46721 670 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 DNM2P50570 870 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 HVCN1Q96D96 273 aa18.02■□□□□ 0.48
GPC1-201ENST00000264039 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.47
GPC1-201ENST00000264039 DDX42Q86XP3 938 aaKnown RBP eCLIP18.02■□□□□ 0.47
GPC1-201ENST00000264039 L3MBTL1Q9Y468 752 aa18.02■□□□□ 0.47
GPC1-201ENST00000264039 ARID4AP29374 1257 aaPredicted RBP18.01■□□□□ 0.47
GPC1-201ENST00000264039 MDH1P40925 334 aaKnown RBP18.01■□□□□ 0.47
GPC1-201ENST00000264039 FANCBQ8NB91 859 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 TCP11L1Q9NUJ3 509 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 GMNCA6NCL1 334 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 PRKAB2O43741 272 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 KIF5BP33176 963 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 LLGL1Q15334 1064 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 ZNF654Q8IZM8 581 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 ARMC2Q8NEN0 867 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 SPAG5Q96R06 1193 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 KRT23Q9C075 422 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 IRAK4Q9NWZ3 460 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 H7C1D1 291 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 KRT13P13646 458 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 TTMPQ5BVD1 217 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 RUFY4Q6ZNE9 571 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 NSMCE1Q8WV22 266 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 STRN4Q9NRL3 753 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 ATP8A1Q9Y2Q0 1164 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 CAPN6Q9Y6Q1 641 aa18.01■□□□□ 0.47
GPC1-201ENST00000264039 SNAP23O00161 211 aa18■□□□□ 0.47
GPC1-201ENST00000264039 MAGOHP61326 146 aaKnown RBP18■□□□□ 0.47
GPC1-201ENST00000264039 DTHD1Q6ZMT9 781 aa18■□□□□ 0.47
GPC1-201ENST00000264039 MAGOHBQ96A72 148 aaKnown RBP18■□□□□ 0.47
GPC1-201ENST00000264039 SAAL1Q96ER3 474 aa18■□□□□ 0.47
GPC1-201ENST00000264039 CYFIP2Q96F07 1278 aa18■□□□□ 0.47
GPC1-201ENST00000264039 CNOT6LQ96LI5 555 aaKnown RBP18■□□□□ 0.47
GPC1-201ENST00000264039 ELAC2Q9BQ52 826 aaKnown RBP18■□□□□ 0.47
GPC1-201ENST00000264039 PCDHA13Q9Y5I0 950 aa18■□□□□ 0.47
GPC1-201ENST00000264039 MROH2AA6NES4 1674 aa18■□□□□ 0.47
GPC1-201ENST00000264039 AGPSO00116 658 aa18■□□□□ 0.47
GPC1-201ENST00000264039 UPP2O95045 317 aa18■□□□□ 0.47
GPC1-201ENST00000264039 FAM153BP0C7A2 387 aa18■□□□□ 0.47
GPC1-201ENST00000264039 AARSP49588 968 aaKnown RBP eCLIP18■□□□□ 0.47
GPC1-201ENST00000264039 FAM153CQ494X1 144 aa18■□□□□ 0.47
GPC1-201ENST00000264039 FAM114A1Q8IWE2 563 aa18■□□□□ 0.47
GPC1-201ENST00000264039 MAP3K14Q99558 947 aa18■□□□□ 0.47
GPC1-201ENST00000264039 SLC39A2Q9NP94 309 aa18■□□□□ 0.47
GPC1-201ENST00000264039 EIF4ENIF1Q9NRA8 985 aaKnown RBP18■□□□□ 0.47
GPC1-201ENST00000264039 FAM153AQ9UHL3 310 aa18■□□□□ 0.47
GPC1-201ENST00000264039 TARSL2A2RTX5 802 aaKnown RBP18■□□□□ 0.47
GPC1-201ENST00000264039 ACTN4O43707 911 aaKnown RBP18■□□□□ 0.47
GPC1-201ENST00000264039 KIF11P52732 1056 aa18■□□□□ 0.47
GPC1-201ENST00000264039 ZKSCAN8Q15776 578 aaPredicted RBP18■□□□□ 0.47
GPC1-201ENST00000264039 PTGISQ16647 500 aa18■□□□□ 0.47
GPC1-201ENST00000264039 DAAM2Q86T65 1068 aa18■□□□□ 0.47
GPC1-201ENST00000264039 UBA5Q9GZZ9 404 aa18■□□□□ 0.47
GPC1-201ENST00000264039 KCNG1Q9UIX4 513 aa18■□□□□ 0.47
GPC1-201ENST00000264039 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
GPC1-201ENST00000264039 DIAPH2O60879 1101 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 TOB1P50616 345 aaPredicted RBP17.99■□□□□ 0.47
GPC1-201ENST00000264039 SESN3P58005 492 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 MDM1Q8TC05 714 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 MLXIPLQ9NP71 852 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 TPX2Q9ULW0 747 aaKnown RBP17.99■□□□□ 0.47
GPC1-201ENST00000264039 SNX12Q9UMY4 172 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 PP2D1A8MPX8 630 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 HERVK_113P62684 666 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 ATP6V1G3Q96LB4 118 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 TBC1D7Q9P0N9 293 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 NEDD4P46934 1319 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
GPC1-201ENST00000264039 PSMD14O00487 310 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 PPP1R12AO14974 1030 aaPredicted RBP17.99■□□□□ 0.47
GPC1-201ENST00000264039 SMIM24O75264 130 aa17.99■□□□□ 0.47
GPC1-201ENST00000264039 GFPT1Q06210 699 aaPredicted RBP17.99■□□□□ 0.47
GPC1-201ENST00000264039 KIAA0753Q2KHM9 967 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms