RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 SLC44A5Q8NCS7 719 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 MTRQ99707 1265 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 DUSP10Q9Y6W6 482 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 USO1O60763 962 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 RNF40O75150 1001 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 ARID5AQ03989 594 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 PFKFB3Q16875 520 aaPredicted RBP18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 C2CD5Q86YS7 1000 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 L1RE1Q9UN81 338 aa18.1■□□□□ 0.49
SNCAIP-202ENST00000261368 CKAP4Q07065 602 aaKnown RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 IL17AQ16552 155 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 FAM84BQ96KN1 310 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 CT47A1Q5JQC4 288 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 PDXDC2PQ6P474 469 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 AFAP1L1Q8TED9 768 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 CNOT6LQ96LI5 555 aaKnown RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 LRRIQ3A6PVS8 624 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 MYO1CO00159 1063 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 RCAN1P53805 252 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 RNASE9P60153 205 aaKnown RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 EHBP1Q8NDI1 1231 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 LCMT1Q9UIC8 334 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 RRP15Q9Y3B9 282 aaKnown RBP18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 FAM205AQ6ZU69 1335 aa18.09■□□□□ 0.49
SNCAIP-202ENST00000261368 MYO5AQ9Y4I1 1855 aaKnown RBP18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 LGALS16A8MUM7 142 aa18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 ARHGAP25P42331 645 aa18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 DNM2P50570 870 aa18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 NBPF5PQ86XG9 351 aaPredicted RBP18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 MAPKAPK5Q8IW41 473 aa18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 BRIP1Q9BX63 1249 aa18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 MINPP1Q9UNW1 487 aa18.08■□□□□ 0.49
SNCAIP-202ENST00000261368 IVLP07476 585 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 PLCG1P19174 1290 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 PBX1P40424 430 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 TTC19Q6DKK2 380 aaPredicted RBP18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 TGFBRAP1Q8WUH2 860 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 SECISBP2LQ93073 1101 aaKnown RBP18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 NHEJ1Q9H9Q4 299 aaPredicted RBP18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 TMEM51Q9NW97 253 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 LRWD1Q9UFC0 647 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 SEC63Q9UGP8 760 aaKnown RBP18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 PCDHA4Q9UN74 947 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 FUT2Q10981 343 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 UBE4AQ14139 1066 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 CALML4Q96GE6 196 aa18.08■□□□□ 0.48
SNCAIP-202ENST00000261368 TRAPPC10P48553 1259 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 MTA3Q9BTC8 594 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 MYO1AQ9UBC5 1043 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 FCER1AP12319 257 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 DIXDC1Q155Q3 683 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 FOXR1Q6PIV2 292 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 FAM71BQ8TC56 605 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 NLRP3Q96P20 1036 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 CENPHQ9H3R5 247 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 ITIH6Q6UXX5 1313 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 TUBB4BP68371 445 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 SLC7A5Q01650 507 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 E2F4Q16254 413 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 LACRTQ9GZZ8 138 aa18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 BIN2Q9UBW5 565 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-202ENST00000261368 TACC1O75410 805 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 MCM3P25205 808 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 IQCEQ6IPM2 695 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 ADSSL1Q8N142 457 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 PLCD3Q8N3E9 789 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 IFIH1Q9BYX4 1025 aaKnown RBP18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 TSPYL1Q9H0U9 437 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 MAP2K7O14733 419 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 RPS8P62241 208 aaKnown RBP18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 FAM114A1Q8IWE2 563 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 MSANTD4Q8NCY6 345 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 CAMTA2O94983 1202 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 NTSR2O95665 410 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 EIF6P56537 245 aaKnown RBP18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 RRAGAQ7L523 313 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 NLRC4Q9NPP4 1024 aa18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 FEZ2Q9UHY8 353 aaPredicted RBP18.06■□□□□ 0.48
SNCAIP-202ENST00000261368 FAM170AA1A519 330 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 NSUN4Q96CB9 384 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 UBA5Q9GZZ9 404 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 SMARCAL1Q9NZC9 954 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 BICDL2A1A5D9 508 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 EEF1GP26641 437 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 ANAPC4Q9UJX5 808 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 TJP1Q07157 1748 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 KLRF2D3W0D1 207 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 BUB1O43683 1085 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 PAFAH1B1P43034 410 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 ITPK1Q13572 414 aa18.05■□□□□ 0.48
SNCAIP-202ENST00000261368 TXNRD1Q16881 649 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms