RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
DDX56-201ENST00000258772 HNRNPLLQ8WVV9 542 aaKnown RBP17.14■□□□□ 0.33
DDX56-201ENST00000258772 ZCCHC17Q9NP64 241 aaKnown RBP17.14■□□□□ 0.33
DDX56-201ENST00000258772 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.14■□□□□ 0.33
DDX56-201ENST00000258772 RAB21Q9UL25 225 aa17.14■□□□□ 0.33
DDX56-201ENST00000258772 A0A1W2PQC6 194 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 RHOBTB3O94955 611 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
DDX56-201ENST00000258772 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 EEF1GP26641 437 aaKnown RBP17.13■□□□□ 0.33
DDX56-201ENST00000258772 OAS2P29728 719 aaKnown RBP17.13■□□□□ 0.33
DDX56-201ENST00000258772 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 OR8K1Q8NGG5 319 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 LGALS16A8MUM7 142 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 STXBP3O00186 592 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 LAD1O00515 517 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 MAP2K7O14733 419 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 NDUFA10O95299 355 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 STIM1Q13586 685 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 GIMAP8Q8ND71 665 aaPredicted RBP17.13■□□□□ 0.33
DDX56-201ENST00000258772 PLIN2Q99541 437 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 THAP9Q9H5L6 903 aa17.13■□□□□ 0.33
DDX56-201ENST00000258772 LUC7L2Q9Y383 392 aaKnown RBP17.13■□□□□ 0.33
DDX56-201ENST00000258772 ROBO3Q96MS0 1386 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 PALM3A6NDB9 673 aaPredicted RBP17.12■□□□□ 0.33
DDX56-201ENST00000258772 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
DDX56-201ENST00000258772 PRPHP41219 470 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
DDX56-201ENST00000258772 WDR66Q8TBY9 1149 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 REXO2Q9Y3B8 237 aaKnown RBP17.12■□□□□ 0.33
DDX56-201ENST00000258772 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 PIP4K2BP78356 416 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 WHAMMP3Q1A5X7 153 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 BEND6Q5SZJ8 279 aaPredicted RBP17.12■□□□□ 0.33
DDX56-201ENST00000258772 LRRC15Q8TF66 581 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 PNKPQ96T60 521 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 DNAJC7Q99615 494 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 TMEM47Q9BQJ4 181 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
DDX56-201ENST00000258772 MYH1P12882 1939 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 PSMA7O14818 248 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 ZPR1O75312 459 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 RC3H1Q5TC82 1133 aaKnown RBP17.11■□□□□ 0.33
DDX56-201ENST00000258772 TTI2Q6NXR4 508 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 SLC44A5Q8NCS7 719 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 TRIM47Q96LD4 638 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 STX8Q9UNK0 236 aa17.11■□□□□ 0.33
DDX56-201ENST00000258772 CTAGE15A4D2H0 777 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 BAG3O95817 575 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 CTAGE8P0CG41 777 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 PPP4CP60510 307 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 AMPD2Q01433 879 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 DIXDC1Q155Q3 683 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 WDR59Q6PJI9 974 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 CTAGE6Q86UF2 777 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 CTAGE4Q8IX94 777 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 GUCA1BQ9UMX6 200 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 NUTM2BA6NNL0 878 aaPredicted RBP17.1■□□□□ 0.33
DDX56-201ENST00000258772 NUTM2EB1AL46 878 aaPredicted RBP17.1■□□□□ 0.33
DDX56-201ENST00000258772 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
DDX56-201ENST00000258772 DHTKD1Q96HY7 919 aaPredicted RBP17.1■□□□□ 0.33
DDX56-201ENST00000258772 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 ZMYND12Q9H0C1 365 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 CUEDC2Q9H467 287 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
DDX56-201ENST00000258772 MYO6Q9UM54 1294 aa17.1■□□□□ 0.33
DDX56-201ENST00000258772 DNM2P50570 870 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 GSTO1P78417 241 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 GRIK5Q16478 980 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 TSR1Q2NL82 804 aaKnown RBP17.09■□□□□ 0.33
DDX56-201ENST00000258772 AK8Q96MA6 479 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 DUSP9Q99956 384 aaKnown RBP17.09■□□□□ 0.33
DDX56-201ENST00000258772 HAUS4Q9H6D7 363 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 GOLGA8HP0CJ92 632 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 RASA1P20936 1047 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 NOC3LQ8WTT2 800 aaKnown RBP17.09■□□□□ 0.33
DDX56-201ENST00000258772 MAGEF1Q9HAY2 307 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 FLT1P17948 1338 aa17.09■□□□□ 0.33
DDX56-201ENST00000258772 ERLIN1O75477 346 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 RHOXF2BP0C7M4 288 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 SRGNP10124 158 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 PLCG1P19174 1290 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 HDXQ7Z353 690 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 CABP7Q86V35 215 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 RHOXF2Q9BQY4 288 aa17.08■□□□□ 0.33
DDX56-201ENST00000258772 TUBGCP2Q9BSJ2 902 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms