RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 C2orf54Q08AI8 447 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 PAK2Q13177 524 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 DPP8Q6V1X1 898 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-201ENST00000249837 MYOCDQ8IZQ8 938 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 TAOK3Q9H2K8 898 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 HPS5Q9UPZ3 1129 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 USP17L3A6NCW0 530 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 USP17L4A6NCW7 530 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 RNF40O75150 1001 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 USP17L1Q7RTZ2 530 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 PNMA1Q8ND90 353 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 DYNLL2Q96FJ2 89 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ISCA1Q9BUE6 129 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 MLXIPQ9HAP2 919 aa5.12□□□□□ -1.59
VPS13C-201ENST00000249837 ERBB3P21860 1342 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 NCK2O43639 380 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 PLCG2P16885 1265 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 RFX5P48382 616 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 SLC7A5Q01650 507 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 ZNF804AQ7Z570 1209 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 WDR66Q8TBY9 1149 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 CPDO75976 1380 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MROH7-TTC4A0A0A0MT08 1334 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 POLR2FP61218 127 aaKnown RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 CACNB1Q02641 598 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MRPL44Q9H9J2 332 aaKnown RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 SLAIN2Q9P270 581 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 RWDD2AQ9UIY3 292 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 GSG1L2A8MUP6 293 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 CHMP2AO43633 222 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 UFL1O94874 794 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 CYP2J2P51589 502 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 DHTKD1Q96HY7 919 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 CARD10Q9BWT7 1032 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 FDPSP14324 419 aaKnown RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 KLHL30Q0D2K2 578 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 TMTC3Q6ZXV5 915 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 P2RX5Q93086 422 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 KLRF2D3W0D1 207 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 OR52Z1P0C646 297 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 ST5P78524 1137 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 VWA3BQ502W6 1294 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 KIF4AO95239 1232 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 NYAP1Q6ZVC0 841 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MED4Q9NPJ6 270 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 TRIM49BA6NDI0 452 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MAP3K9P80192 1104 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 CASP8Q14790 479 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 C8orf37Q96NL8 207 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 FBXO2Q9UK22 296 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MYH15Q9Y2K3 1946 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 RAD9BQ6WBX8 426 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 HOOK3Q86VS8 718 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 LRRN4CLQ8ND94 238 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MGARPQ8TDB4 240 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 RFX7Q2KHR2 1363 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MSL1Q68DK7 614 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 COA7Q96BR5 231 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 GPR101Q96P66 508 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 FRMD4BQ9Y2L6 1034 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 KRIT1O00522 736 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 NMT2O60551 498 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 RABL6Q3YEC7 729 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 ERFEQ4G0M1 354 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 SMCR8Q8TEV9 937 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 RNF26Q9BY78 433 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-201ENST00000249837 HAUS4Q9H6D7 363 aa5.11□□□□□ -1.59
VPS13C-201ENST00000249837 MYH2Q9UKX2 1941 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 E7EVH7 732 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 UBE2Q2LH0YL09 131 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 TRIM66O15016 1216 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 CYP4A11Q02928 519 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 GSDMAQ96QA5 445 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 EHMT1Q9H9B1 1298 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 NDUFA10O95299 355 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 CTNNA2P26232 953 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 TCP11X2Q5H9J9 407 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 HS2ST1Q7LGA3 356 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PPFIA1Q13136 1202 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ARHGAP44Q17R89 818 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC84Q86UT8 332 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 CCDC26Q8TAB7 109 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 MRRFQ96E11 262 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ZC3H12CQ9C0D7 883 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 IFT172Q9UG01 1749 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PLA2G4AP47712 749 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 TFR2Q9UP52 801 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ADGRL3Q9HAR2 1447 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 GCOM1H8Y6P7 765 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 MOCS3O95396 460 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 MYZAPP0CAP1 466 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 PPP2R5BQ15173 497 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 LLGL1Q15334 1064 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ZRSR2Q15696 482 aaKnown RBP5.1□□□□□ -1.59
VPS13C-201ENST00000249837 ALX1Q15699 326 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 SUSD4Q5VX71 490 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 STXBP4Q6ZWJ1 553 aa5.1□□□□□ -1.59
VPS13C-201ENST00000249837 LGALS16A8MUM7 142 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms