RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 PPP1R9AQ9ULJ8 1098 aa12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 CCDC34Q96HJ3 373 aa12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 MAD2L2Q9UI95 211 aa12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 KCNJ14Q9UNX9 436 aa12.75□□□□□ -0.37
TNFAIP3-201ENST00000237289 PALM3A6NDB9 673 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 KRT40Q6A162 431 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 TACC3Q9Y6A5 838 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 FBXL16Q8N461 479 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 CEP131Q9UPN4 1083 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 HERVK_113P62684 666 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 ZRSR1Q15695 479 aaKnown RBP12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 CST9Q5W186 159 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 DIS3L2Q8IYB7 885 aaKnown RBP12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 ANKRD13CQ8N6S4 541 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
TNFAIP3-201ENST00000237289 KIAA1551Q9HCM1 1747 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 MAST2Q6P0Q8 1798 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 IGKV6D-41A0A0C4DH26 115 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 DSG3P32926 999 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 CATSPERGQ6ZRH7 1159 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 P2RX7Q99572 595 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 AGXT2Q9BYV1 514 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 ABCB11O95342 1321 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 KRT85P78386 507 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 JMJD4Q9H9V9 463 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 MYH7P12883 1935 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 MYCLP12524 364 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 JAG1P78504 1218 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 PFKFB3Q16875 520 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 KRT25Q7Z3Z0 450 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 BLIDQ8IZY5 108 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 ACAD9Q9H845 621 aa12.73□□□□□ -0.37
TNFAIP3-201ENST00000237289 A0A0G2JLL6 359 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 TRPA1O75762 1119 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 SLC25A27O95847 323 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 CYP2C8P10632 490 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 SYT1P21579 422 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 HOXD10P28358 340 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 PRRT2Q7Z6L0 340 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 ADD3Q9UEY8 706 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 DGKZQ13574 1117 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 RNF207Q6ZRF8 634 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 FOSP01100 380 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 FCER1AP12319 257 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 TKFCQ3LXA3 575 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 CPA4Q9UI42 421 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 BTBD19C9JJ37 291 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
TNFAIP3-201ENST00000237289 BAZ2AQ9UIF9 1905 aaKnown RBP12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 CUL4AQ13619 759 aa12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 TREML2Q5T2D2 321 aa12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 STK36Q9NRP7 1315 aa12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 ZSCAN22P10073 491 aaPredicted RBP12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 RASGRP2Q7LDG7 609 aa12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 MMP19Q99542 508 aa12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 NAP1L4Q99733 375 aaKnown RBP12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 KCNH4Q9UQ05 1017 aa12.71□□□□□ -0.37
TNFAIP3-201ENST00000237289 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.38
TNFAIP3-201ENST00000237289 EVCP57679 992 aa12.71□□□□□ -0.38
TNFAIP3-201ENST00000237289 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.38
TNFAIP3-201ENST00000237289 VWA5AO00534 786 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 FIBPO43427 364 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 LETM2Q2VYF4 491 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 TXLNAP40222 546 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 FBXO18Q8NFZ0 1043 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 C12orf42Q96LP6 360 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 ICAM1P05362 532 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 SLC10A3P09131 477 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms