RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 GLIS3Q8NEA6 775 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
DDX11-201ENST00000228264 DNAJC5Q9H3Z4 198 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 PSMD14O00487 310 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 IRF6O14896 467 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 RPN1P04843 607 aaKnown RBP11.69□□□□□ -0.54
DDX11-201ENST00000228264 CSF1RP07333 972 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 PDE6BP35913 854 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 OR2W6PQ8NHA6 318 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 FAM76AQ8TAV0 307 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
DDX11-201ENST00000228264 MNAT1P51948 309 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 CALR3Q96L12 384 aaKnown RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 GSDMAQ96QA5 445 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 FAM207AQ9NSI2 230 aaPredicted RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 LUC7L2Q9Y383 392 aaKnown RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 MYH2Q9UKX2 1941 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 GLI1P08151 1106 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 CYP2D6P10635 497 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 SEC23AQ15436 765 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 ANKRD18AQ8IVF6 992 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 OR8K1Q8NGG5 319 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 TNFRSF25Q93038 417 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 JPH2Q9BR39 696 aaPredicted RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 CARSP49589 748 aaKnown RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 ZNF507Q8TCN5 953 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 SLC4A9Q96Q91 983 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 CAPS2Q9BXY5 557 aa11.68□□□□□ -0.54
DDX11-201ENST00000228264 MKRN1Q9UHC7 482 aaKnown RBP11.68□□□□□ -0.54
DDX11-201ENST00000228264 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 MYH7P12883 1935 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 COL4A1P02462 1669 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 USP54Q70EL1 1684 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 SSBP05455 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
DDX11-201ENST00000228264 TRIM21P19474 475 aaKnown RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 KRT2P35908 639 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 PAPD7Q5XG87 772 aaKnown RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 AENQ8WTP8 325 aaKnown RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 RNPC3Q96LT9 517 aaKnown RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 UBAC1Q9BSL1 405 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 TRMT112Q9UI30 125 aaKnown RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 FER1L4A9Z1Z3 1794 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 MYO1BO43795 1136 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 ACTN3Q08043 901 aaPredicted RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 STK4Q13043 487 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 CCDC96Q2M329 555 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 NLRP10Q86W26 655 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 ZNF384Q8TF68 577 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 IFT81Q8WYA0 676 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 ZIM3Q96PE6 472 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 DUSP9Q99956 384 aaKnown RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 H0YHG0 523 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 CTSWP56202 376 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 SARNPP82979 210 aaKnown RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 BIRC2Q13490 618 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 ZNF513Q8N8E2 541 aaPredicted RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
DDX11-201ENST00000228264 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 RWDD2AQ9UIY3 292 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 NFU1Q9UMS0 254 aa11.67□□□□□ -0.54
DDX11-201ENST00000228264 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 SHOX2O60902 331 aaPredicted RBP11.66□□□□□ -0.54
DDX11-201ENST00000228264 ATP2C2O75185 946 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 EIF5P55010 431 aaKnown RBP11.66□□□□□ -0.54
DDX11-201ENST00000228264 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
DDX11-201ENST00000228264 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 PAIP2Q9BPZ3 127 aaKnown RBP11.66□□□□□ -0.54
DDX11-201ENST00000228264 ARHGAP20Q9P2F6 1191 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 KIF1CO43896 1103 aaKnown RBP11.66□□□□□ -0.54
DDX11-201ENST00000228264 GYG1P46976 350 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 MMS22LQ6ZRQ5 1243 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 EFCAB13Q8IY85 973 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 STAG2Q8N3U4 1231 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 SPATA4Q8NEY3 305 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 GJA10Q969M2 543 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 CTAGE1Q96RT6 745 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 DNAJC7Q99615 494 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 ITIH6Q6UXX5 1313 aa11.66□□□□□ -0.54
DDX11-201ENST00000228264 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDX11-201ENST00000228264 XBP1P17861 261 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
DDX11-201ENST00000228264 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 ANKRD20A12PQ8NF67 263 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 MTMR8Q96EF0 704 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 CENPHQ9H3R5 247 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 BCL9LQ86UU0 1499 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 NUP188Q5SRE5 1749 aa11.65□□□□□ -0.54
DDX11-201ENST00000228264 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms