RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 TERF1P54274 439 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 SNAP25P60880 206 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 PRR12Q9ULL5 1215 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 ZKSCAN5Q9Y2L8 839 aa25.26■■□□□ 1.63
HOXC8-201ENST00000040584 ZBTB5O15062 677 aa25.25■■□□□ 1.63
HOXC8-201ENST00000040584 PPP1R11O60927 126 aaPredicted RBP25.25■■□□□ 1.63
HOXC8-201ENST00000040584 NPY5RQ15761 445 aa25.25■■□□□ 1.63
HOXC8-201ENST00000040584 WDR46O15213 610 aaKnown RBP25.24■■□□□ 1.63
HOXC8-201ENST00000040584 FIBPO43427 364 aa25.24■■□□□ 1.63
HOXC8-201ENST00000040584 HMGCS2P54868 508 aa25.24■■□□□ 1.63
HOXC8-201ENST00000040584 NR5A1Q13285 461 aa25.24■■□□□ 1.63
HOXC8-201ENST00000040584 CDC37Q16543 378 aaPredicted RBP25.24■■□□□ 1.63
HOXC8-201ENST00000040584 COA7Q96BR5 231 aa25.24■■□□□ 1.63
HOXC8-201ENST00000040584 FBXO28Q9NVF7 368 aa25.24■■□□□ 1.63
HOXC8-201ENST00000040584 TFIP11Q9UBB9 837 aaKnown RBP25.24■■□□□ 1.63
HOXC8-201ENST00000040584 VCAM1P19320 739 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 KRT2P35908 639 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 NAPAP54920 295 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 QRICH1Q2TAL8 776 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 SAMD1Q6SPF0 538 aaPredicted RBP25.23■■□□□ 1.63
HOXC8-201ENST00000040584 RNF214Q8ND24 703 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 CHURC1Q8WUH1 139 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 KIFC2Q96AC6 838 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 SCAND2PQ9GZW5 306 aaPredicted RBP25.23■■□□□ 1.63
HOXC8-201ENST00000040584 FOXP1Q9H334 677 aaPredicted RBP25.23■■□□□ 1.63
HOXC8-201ENST00000040584 FEM1BQ9UK73 627 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 ADAMTS3O15072 1205 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 TPM2P07951 284 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 ATL3Q6DD88 541 aa25.23■■□□□ 1.63
HOXC8-201ENST00000040584 C19orf81C9J6K1 198 aa25.22■■□□□ 1.63
HOXC8-201ENST00000040584 FAM177A1Q8N128 213 aaPredicted RBP25.22■■□□□ 1.63
HOXC8-201ENST00000040584 CCDC148Q8NFR7 591 aa25.22■■□□□ 1.63
HOXC8-201ENST00000040584 PLA2G6O60733 806 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 MYSM1Q5VVJ2 828 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 FAM160B2Q86V87 743 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 NOSTRINQ8IVI9 506 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 OTUD5Q96G74 571 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 TANGO6Q9C0B7 1094 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 BRMS1Q9HCU9 246 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 MYH15Q9Y2K3 1946 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 CALML3P27482 149 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 LDLRAD1Q5T700 205 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 ERO1BQ86YB8 467 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 RPAP3Q9H6T3 665 aaPredicted RBP25.21■■□□□ 1.63
HOXC8-201ENST00000040584 CFAP45Q9UL16 551 aa25.21■■□□□ 1.63
HOXC8-201ENST00000040584 hCG_1984214I3L0E3 225 aa25.2■■□□□ 1.62
HOXC8-201ENST00000040584 ZNF713Q8N859 430 aaPredicted RBP25.2■■□□□ 1.62
HOXC8-201ENST00000040584 CCDC12Q8WUD4 166 aaPredicted RBP25.2■■□□□ 1.62
HOXC8-201ENST00000040584 C12orf42Q96LP6 360 aa25.2■■□□□ 1.62
HOXC8-201ENST00000040584 ZNF396Q96N95 335 aaPredicted RBP25.2■■□□□ 1.62
HOXC8-201ENST00000040584 FTOQ9C0B1 505 aaKnown RBP eCLIP25.2■■□□□ 1.62
HOXC8-201ENST00000040584 PCDHA4Q9UN74 947 aa25.2■■□□□ 1.62
HOXC8-201ENST00000040584 SMCO2A6NFE2 343 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 SPDYE5A6NIY4 337 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 PPATQ06203 517 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 CHADLQ6NUI6 762 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 BLIDQ8IZY5 108 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 ZMYND12Q9H0C1 365 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 TMOD4Q9NZQ9 345 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 IRF6O14896 467 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 CELF2O95319 508 aaKnown RBP25.19■■□□□ 1.62
HOXC8-201ENST00000040584 CEBPZQ03701 1054 aaKnown RBP25.19■■□□□ 1.62
HOXC8-201ENST00000040584 RBM46Q8TBY0 533 aaKnown RBP25.19■■□□□ 1.62
HOXC8-201ENST00000040584 USP28Q96RU2 1077 aa25.19■■□□□ 1.62
HOXC8-201ENST00000040584 NOM1Q5C9Z4 860 aaKnown RBP25.18■■□□□ 1.62
HOXC8-201ENST00000040584 EARS2Q5JPH6 523 aaKnown RBP25.18■■□□□ 1.62
HOXC8-201ENST00000040584 LEO1Q8WVC0 666 aaPredicted RBP25.18■■□□□ 1.62
HOXC8-201ENST00000040584 TNFRSF25Q93038 417 aa25.18■■□□□ 1.62
HOXC8-201ENST00000040584 SLF1Q9BQI6 1058 aa25.18■■□□□ 1.62
HOXC8-201ENST00000040584 PCDHA1Q9Y5I3 950 aa25.18■■□□□ 1.62
HOXC8-201ENST00000040584 FLOT1O75955 427 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 ITGBL1O95965 494 aaPredicted RBP25.17■■□□□ 1.62
HOXC8-201ENST00000040584 SH3D19Q5HYK7 790 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 GALNT17Q6IS24 598 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 OPTNQ96CV9 577 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 AMNQ9BXJ7 453 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 RANBP17Q9H2T7 1088 aaKnown RBP25.17■■□□□ 1.62
HOXC8-201ENST00000040584 GBA2Q9HCG7 927 aaPredicted RBP25.17■■□□□ 1.62
HOXC8-201ENST00000040584 C6orf50Q9HD87 102 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 FAM205CA6NFA0 338 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 PTMAP06454 111 aaKnown RBP25.17■■□□□ 1.62
HOXC8-201ENST00000040584 TAL1P17542 331 aaPredicted RBP25.17■■□□□ 1.62
HOXC8-201ENST00000040584 CCDC174Q6PII3 467 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 FBXO11Q86XK2 927 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 PRPF38AQ8NAV1 312 aaKnown RBP25.17■■□□□ 1.62
HOXC8-201ENST00000040584 DAGLBQ8NCG7 672 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 RASGRP4Q8TDF6 673 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 SPATA32Q96LK8 384 aa25.17■■□□□ 1.62
HOXC8-201ENST00000040584 GNA11P29992 359 aa25.16■■□□□ 1.62
HOXC8-201ENST00000040584 USH1GQ495M9 461 aa25.16■■□□□ 1.62
HOXC8-201ENST00000040584 FUCA2Q9BTY2 467 aa25.16■■□□□ 1.62
HOXC8-201ENST00000040584 GPBP1L1Q9HC44 474 aaPredicted RBP25.16■■□□□ 1.62
HOXC8-201ENST00000040584 RTEL1Q9NZ71 1219 aa25.16■■□□□ 1.62
HOXC8-201ENST00000040584 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.16■■□□□ 1.62
HOXC8-201ENST00000040584 ESYT2A0FGR8 921 aa25.15■■□□□ 1.62
HOXC8-201ENST00000040584 M0R2N6 131 aa25.15■■□□□ 1.62
HOXC8-201ENST00000040584 CCDC192P0DO97 292 aa25.15■■□□□ 1.62
HOXC8-201ENST00000040584 PPP1R18Q6NYC8 613 aa25.15■■□□□ 1.62
HOXC8-201ENST00000040584 SLC10A4Q96EP9 437 aa25.15■■□□□ 1.62
HOXC8-201ENST00000040584 POLR3EQ9NVU0 708 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms