RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Triml1Q8BVP1 470 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Matr3Q8K310 846 aaKnown RBP28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Nip7Q9CXK8 180 aaKnown RBP28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Nav1Q8CH77 1875 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Etnk2A7MCT6 385 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Abl1P00520 1123 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 PpardP35396 440 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Siah1aP61092 282 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Secisbp2lQ6A098 1086 aaKnown RBP28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Srrm3Q80WV7 648 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Ccdc181Q80ZU5 509 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 3830417A13RikQ8BQJ2 303 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Ccdc186Q8C9S4 917 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 4930550L24RikQ99PA7 320 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Ubxn6Q99PL6 442 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Pcdh11xF6ZNL5 1338 aa28.58■■■□□ 2.17
Ccdc9-202ENSMUST00000118976 Ddx23D3Z0M9 819 aaKnown RBP28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Snrpa1P57784 255 aaKnown RBP28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ccdc33Q3ULW6 985 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Mybpc2Q5XKE0 1136 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Cnnm4Q69ZF7 771 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Stn1Q8K2X3 378 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Exoc1Q8R3S6 894 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 MymkQ9D1N4 221 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Slc5a4aQ9ET37 656 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Cfap44E9Q5M6 1843 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Gm28919A0A087WP35 240 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Vmn2r78K7N6U5 853 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Nr5a1P33242 462 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Tmtc2Q56A06 836 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Sycp1Q62209 993 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Kdm1aQ6ZQ88 853 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Rufy1Q8BIJ7 712 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Q8BWG4 1187 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Kank3Q9Z1P7 791 aa28.57■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Fkbp1aP26883 108 aaKnown RBP28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Slc9a2Q3ZAS0 814 aa28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Mettl25Q6NXH8 597 aa28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Phf8Q80TJ7 1023 aa28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 QarsQ8BML9 775 aa28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Tmem60Q8K174 133 aa28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ushbp1Q8R370 680 aa28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Lrrc59Q922Q8 307 aaKnown RBP28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 NagaQ9QWR8 415 aa28.56■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Pfkfb3A7UAK5 555 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Tcp1P11983 556 aaKnown RBP28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Zfp781Q0P5U5 243 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Tex11Q14AT2 947 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 HelbQ6NVF4 1074 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Asic3Q6X1Y6 530 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ltbp4Q8K4G1 1666 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Skap2Q3UND0 358 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Lrrc42Q8R2U7 421 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Eps8l2Q99K30 729 aa28.55■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Hnrnph3D3Z3N4 346 aaKnown RBP28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Bnip3O55003 187 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Fam107bQ3TGF2 131 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ddx49Q4FZF3 480 aaKnown RBP28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ccnl1Q52KE7 532 aaKnown RBP28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Krt42Q6IFX2 452 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 F13a1Q8BH61 732 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Atp1a1Q8VDN2 1023 aaKnown RBP28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Lztr1Q9CQ33 837 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 CenphQ9QYM8 241 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Krt78E9Q0F0 1068 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Jade2Q6ZQF7 829 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 P3h4Q8K2B0 443 aa28.54■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Fam186bD3Z420 943 aa28.53■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Pde1cQ64338 706 aa28.53■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ubxn1Q922Y1 297 aa28.53■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ndufab1Q9CR21 156 aa28.53■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Mis12Q9CY25 206 aa28.53■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 CltaO08585 235 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Plagl2Q925T4 496 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Mmtag2Q99LX5 260 aaKnown RBP28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Gm1758F6VZZ1 202 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Chrna9G3X8Z7 479 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Ice2Q3UZ18 988 aaKnown RBP28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Cep70Q6IQY5 616 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Alg1Q921Q3 482 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Efhd1Q9D4J1 240 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 FignQ9ERZ6 759 aa28.52■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Trim43aQ3TL54 445 aa28.51■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Atf3Q60765 181 aa28.51■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Slc9a1Q61165 820 aa28.51■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Alpk1Q9CXB8 1231 aa28.51■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Cxcl11Q9JHH5 100 aa28.51■■■□□ 2.16
Ccdc9-202ENSMUST00000118976 Apol7aB2RT54 418 aa28.51■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ankrd35E9Q9D8 996 aa28.51■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Serpinb6Q60854 378 aa28.51■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Grin3bQ91ZU9 1003 aa28.51■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Actn2Q9JI91 894 aa28.51■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Akr1b10G5E895 316 aa28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 1700013D24RikQ0P521 120 aa28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Gpbp1Q6NXH3 473 aaKnown RBP28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 HdlbpQ8VDJ3 1268 aaKnown RBP28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Aipl1Q924K1 328 aa28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Ebag9Q9D0V7 213 aa28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Gpaa1Q9WTK3 621 aa28.5■■■□□ 2.15
Ccdc9-202ENSMUST00000118976 Tex13cD3YU32 604 aa28.5■■■□□ 2.15
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms