RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Otud7bB2RUR8 840 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nova2D3YVV7 556 aaKnown RBP8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Scgb2b7D3YYY1 112 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ano9P86044 747 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Trim37Q6PCX9 961 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ublcp1Q8BGR9 318 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Vcpip1Q8CDG3 1220 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Prl7b1Q8CGZ9 251 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 P3h4Q8K2B0 443 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 NptxrQ99J85 493 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Smco2Q9DA21 347 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 GsdmeQ9Z2D3 512 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Sec31aQ3UPL0 1230 aaKnown RBP8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cnga2Q62398 664 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Rbm12b2Q66JV4 834 aaKnown RBP8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Atp1a1Q8VDN2 1023 aaKnown RBP8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Slc12a6Q924N4 1150 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 PawrQ925B0 333 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Haus2Q9CQS9 234 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cfap53Q9D439 514 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 3830403N18RikQ9D6C3 208 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Fmnl1Q9JL26 1094 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ulk4Q3V129 1303 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Lama4P97927 1816 aa8.43□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Flt4P35917 1363 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Itga9B8JK39 1036 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ncf2O70145 525 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Sox13Q04891 613 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 SfswapQ3USH5 945 aaKnown RBP8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Acap3Q6NXL5 833 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 SrlQ7TQ48 910 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tmem87bQ8BKU8 555 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Klhl7Q8BUL5 586 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Skor1Q8BX46 964 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Stap2Q8R0L1 411 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Foxo3Q9WVH4 672 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Qser1A2BIE1 1698 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ercc6l2Q9JIM3 1537 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Fam47eD3YWC7 402 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Mfsd4b4J3QNS5 503 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Serpina1bP22599 413 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Zic5Q7TQ40 622 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Stk38lQ7TSE6 464 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 SympkQ80X82 1284 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cep85Q8BMK0 761 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gbp9Q8BTS3 619 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Lrrd1Q8C0R9 853 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Q8C6G1 249 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gtpbp10Q8K013 366 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Amotl2Q8K371 772 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Armcx6Q8K3A6 301 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ubxn6Q99PL6 442 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ccdc105Q9D4K7 499 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tfcp2Q9ERA0 502 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Arhgap33Q80YF9 1305 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Zfp853A0A1D5RM95 733 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gdap1O88741 358 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Mks1Q5SW45 561 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 PapolaQ61183 739 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Rgl2Q61193 778 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Acbd3Q8BMP6 525 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Man2a2Q8BRK9 1152 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Anapc5Q8BTZ4 740 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 ImmtQ8CAQ8 757 aaKnown RBP8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Gramd4Q8CB44 633 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Pkn3Q8K045 878 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Psmd2Q8VDM4 908 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Pramef12Q9D2F1 463 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Slit2Q9R1B9 1521 aa8.42□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nup153E9Q3G8 1462 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 OvosQ3UU35 1456 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Col1a2Q01149 1372 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Phldb3E9QAF4 648 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tcp1P11983 556 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 PparaP23204 468 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ctnna1P26231 906 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 MagohP61327 146 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Cep131Q62036 1060 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ncapg2Q6DFV1 1138 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 E330017A01RikQ8BU47 192 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ttc22Q8C159 568 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Setdb2Q8C267 713 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Rpa1Q8VEE4 623 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 MagohbQ9CQL1 146 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ndst4Q9EQW8 872 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Klra17Q9JMA4 273 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nwd1A6H603 1563 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 InsrrQ9WTL4 1300 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Prl3d3A0A0M6L0J6 224 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 RelaQ04207 549 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Nlrp2Q4PLS0 1046 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Kctd19Q562E2 927 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ppp2r2aQ6P1F6 447 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 AmphQ7TQF7 686 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Ripor2Q80U16 1078 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tcp10aQ80W76 438 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Agap1Q8BXK8 857 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Lrrc4cQ8C031 640 aa8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Sugp1Q8CH02 643 aaKnown RBP8.41□□□□□ -1.06
Bdnf-209ENSMUST00000111050 Tspyl4Q8VD63 406 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms