RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Usp13Q5BKP2 858 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Hoxa13Q62424 386 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Acsl3Q9CZW4 720 aaKnown RBP10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Tubb4aQ9D6F9 444 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Klhl40Q9D783 621 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Myl7Q9QVP4 175 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Slfn1Q9Z0I7 337 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 4932429P05RikA2ADI4 785 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Cdk4P30285 303 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Myo19Q5SV80 963 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Hdac4Q6NZM9 1076 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Sf3a3Q9D554 501 aaKnown RBP10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Akap8Q9DBR0 687 aaKnown RBP10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Klhl34A2AI76 644 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Slc27a3O88561 667 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ighmbp2P40694 993 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Eef2P58252 858 aaKnown RBP10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ttbk2Q3UVR3 1243 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ckap2Q3V1H1 664 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Tbc1d9bQ5SVR0 1263 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Kiaa0319Q5SZV5 1081 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ccpg1Q640L3 753 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Rbm12b2Q66JV4 834 aaKnown RBP10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Aggf1Q7TN31 711 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Srgap2Q91Z67 1071 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Sf3b3Q921M3 1217 aaKnown RBP10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Tsnaxip1Q99P25 704 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 Syce1Q9D495 329 aa10.63□□□□□ -0.71
Trim9-201ENSMUST00000110520 GalcP54818 684 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Acot10Q32MW3 439 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Slc2a13Q3UHK1 637 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Mars2Q499X9 586 aaKnown RBP10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Krt87Q6IMF0 495 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Strip1Q8C079 837 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ccdc113Q8C5T8 377 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Scyl2Q8CFE4 930 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 TxlnbQ8VBT1 685 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Lzts2Q91YU6 671 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Sertad1Q9JL10 236 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Cd2apQ9JLQ0 637 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Gm5134E9QAB5 671 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ppp1r9aH3BJD6 1292 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Cetn3O35648 167 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Irx2P81066 474 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Eif3j1Q3UGC7 261 aaKnown RBP10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Eif3j2Q66JS6 263 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 PigsQ6PD26 555 aaKnown RBP10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Olfr119Q7TRJ5 321 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 SowahdQ8BY98 327 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Lrit1Q8K099 624 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Bst2Q8R2Q8 172 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Nxf1Q99JX7 618 aaKnown RBP10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Smc1aQ9CU62 1233 aaKnown RBP10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ctnnbl1Q9CWL8 563 aaKnown RBP10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Prdm2A2A7B5 1709 aaKnown RBP10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Rsbn1lD3Z0K6 821 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Gm3893E9Q1I1 302 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 NppbP40753 121 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Chp1P61022 195 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ccdc189Q6NZQ0 333 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 MypopQ8R4U1 393 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Sar1bQ9CQC9 198 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Arfgef2A2A5R2 1792 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Nfat5Q9WV30 1534 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ccdc78D3Z5T1 437 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Gm4758L7N258 96 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Il17raQ60943 864 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ccdc25Q78PG9 208 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ddx19bQ8BZY3 494 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Slc18a1Q8R090 521 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ifih1Q8R5F7 1025 aa10.62□□□□□ -0.71
Trim9-201ENSMUST00000110520 Slit2Q9R1B9 1521 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Surf1P09925 306 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Slc7a1Q09143 622 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Eepd1Q3TGW2 569 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Kiaa1211Q5PR69 1207 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 RalylQ8BTF8 293 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Klhl7Q8BUL5 586 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Shisa4Q8CA71 197 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Fam161bQ8CB59 589 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Tmem60Q8K174 133 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Ppp2r5dQ91V89 594 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Dhx30Q99PU8 1217 aaKnown RBP10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Glrx3Q9CQM9 337 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Tpcn1Q9EQJ0 817 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Slit1Q80TR4 1531 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Clrn2B2RVW2 232 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Pagr1bF6V0H0 108 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Rgl1Q60695 768 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Gpr101Q80T62 511 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Camsap3Q80VC9 1252 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Klhl20Q8VCK5 604 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Pagr1aQ99L02 253 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Mfap3lQ9D3X9 409 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Cfap53Q9D439 514 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Mad2l2Q9D752 211 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Fbxl16A2RT62 479 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Skor2A7M7C7 1008 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Zfp408H7BX78 710 aa10.61□□□□□ -0.71
Trim9-201ENSMUST00000110520 Dnm2P39054 870 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms