RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Ppp1r3fQ9JIG4 799 aa16.07■□□□□ 0.16
Chd4-201ENSMUST00000056889 Slc27a3O88561 667 aa16.07■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ap1m1P35585 423 aa16.07■□□□□ 0.16
Chd4-201ENSMUST00000056889 Sash1P59808 1230 aa16.07■□□□□ 0.16
Chd4-201ENSMUST00000056889 Caprin1Q60865 707 aaKnown RBP16.07■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ncoa7Q6DFV7 943 aa16.07■□□□□ 0.16
Chd4-201ENSMUST00000056889 Cnot10Q8BH15 744 aa16.07■□□□□ 0.16
Chd4-201ENSMUST00000056889 A0A1W2P7S8 802 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Hspa1lP16627 641 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Cdc5lQ6A068 802 aaKnown RBP16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Camsap3Q80VC9 1252 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Zfp449Q8CB76 518 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Dbn1Q9QXS6 706 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Cops6O88545 324 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Irf5P56477 497 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Fgd4Q91ZT5 766 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Rmdn1Q9DCV4 305 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 A0A1W2P6Q8 802 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Gm9048A0A1W2P7H4 802 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 A0A1W2P7Z8 802 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Gm9046A0A1W2P855 802 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Tnni3P48787 211 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ano9P86044 747 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Fam81aQ3UXZ6 364 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Mrps22Q9CXW2 359 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Naip5Q9R016 1403 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Znf507Q6ZPY5 941 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Wdr27Q8C5V5 780 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Mfap3Q922T2 349 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Gm5580A0A0N4SVP8 411 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 TsksO54887 585 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Traf5P70191 558 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 OcrlQ6NVF0 900 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Palm2Q8BR92 376 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Dach2Q925Q8 634 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ccdc103Q9D9P2 237 aa16.06■□□□□ 0.16
Chd4-201ENSMUST00000056889 Pkp1P97350 728 aaKnown RBP16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Parp3Q3ULW8 533 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ccdc154Q6RUT8 657 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 E330017A01RikQ8BU47 192 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Gimd1E9PW74 217 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Zfp408H7BX78 710 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Srrm1Q52KI8 946 aaKnown RBP16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ccdc169Q8BXX9 214 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 CgasQ8C6L5 507 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Nek9Q8K1R7 984 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Pcif1P59114 706 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Tbc1d30Q69ZT9 766 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ccdc159Q8C963 411 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Polr3cQ9D483 533 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Gm6370A0A0G2JGX9 315 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Gm6309L7N481 315 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Thumpd3P97770 505 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 PsdQ5DTT2 1024 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Dclk2Q6PGN3 756 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 CnstQ8CBC4 711 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Pls3Q99K51 630 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Rprd2Q6NXI6 1469 aaKnown RBP16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 TxkP42682 527 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Tcp11Q01755 566 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Cdca7lQ922M5 438 aa16.05■□□□□ 0.16
Chd4-201ENSMUST00000056889 Dynlt1P51807 113 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ccdc50Q810U5 305 aaKnown RBP16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Cd209bQ8CJ91 325 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Actn4P57780 912 aaKnown RBP16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Mms19Q9D071 1031 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Naa16Q9DBB4 864 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Pex11aQ9Z211 246 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Atad2bE9Q166 1460 aaKnown RBP16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Tmem94Q7TSH8 1360 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Cyp24a1Q64441 514 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Lsm14bQ8CGC4 385 aaKnown RBP16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Pex3Q9QXY9 372 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 XlrP05531 208 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Zc3h18Q0P678 948 aaKnown RBP16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Pank4Q80YV4 820 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Tsr1Q5SWD9 803 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ankrd45Q810N6 248 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Myef2Q8C854 591 aaKnown RBP16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ccnyl1D3YUJ3 367 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ddit3P35639 168 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Znf280dQ68FE8 974 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Anapc5Q8BTZ4 740 aa16.04■□□□□ 0.16
Chd4-201ENSMUST00000056889 Cep85lA0A1W2P884 806 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Prkg1P0C605 671 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Lmnb2P21619 596 aaKnown RBP16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Stx1bP61264 288 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Rnf207Q3V3A7 635 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Phactr3Q8BYK5 558 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Paip2bQ91W45 136 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Myo1cQ9WTI7 1063 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ankrd50F7BE84 1390 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Prl3d3A0A0M6L0J6 224 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Ttc13A0A1L1SSC7 844 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Gm11549A0A286YD83 63 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Nr1i2O54915 431 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Epc1Q8C9X6 813 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Faf1P54731 649 aa16.03■□□□□ 0.16
Chd4-201ENSMUST00000056889 Syne3Q4FZC9 975 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 205.5 ms