RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	NSP1	P14907	823 aa	Known RBP	4.71	□□□□□ -1.66
SUP35	YDR172W	ART10	P18634	518 aa	Known RBP	4.71	□□□□□ -1.66
SUP35	YDR172W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
SUP35	YDR172W	PRP6	P19735	899 aa	Predicted RBP	4.71	□□□□□ -1.66
SUP35	YDR172W	AMD2	P22580	549 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	PGS1	P25578	521 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	SPR1	P32603	445 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	RFS1	P38234	210 aa	Known RBP	4.71	□□□□□ -1.66
SUP35	YDR172W	GGA2	P38817	585 aa	Known RBP	4.71	□□□□□ -1.66
SUP35	YDR172W	YHR131C	P38835	850 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	PIK1	P39104	1066 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	JEM1	P40358	645 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	SET2	P46995	733 aa	Known RBP	4.71	□□□□□ -1.66
SUP35	YDR172W	TEL2	P53038	688 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	COG2	P53271	262 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	PIR3	Q03180	325 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	HER2	Q03557	464 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	HFD1	Q04458	532 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	GRX8	Q05926	109 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	SVS1	Q12254	260 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	RMD5	Q12508	421 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	YPL247C	Q12523	523 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	HSC82	P15108	705 aa	Known RBP	4.7	□□□□□ -1.66
SUP35	YDR172W	ERS1	P17261	260 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	SAN1	P22470	610 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	SFA1	P32771	386 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	PTC1	P35182	281 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	BZZ1	P38822	633 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	MAM33	P40513	266 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	YIR016W	P40572	265 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	SEC26	P41810	973 aa	Known RBP	4.7	□□□□□ -1.66
SUP35	YDR172W	DLD2	P46681	530 aa	Known RBP	4.7	□□□□□ -1.66
SUP35	YDR172W	MET13	P53128	600 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	DOS2	P54858	310 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	CDC14	Q00684	551 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	MET14	Q02196	202 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	EMI2	Q04409	500 aa	Known RBP	4.7	□□□□□ -1.66
SUP35	YDR172W	ASA1	Q06822	443 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	PEX15	Q08215	383 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	TRE2	Q08693	809 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	YIG1	Q08956	461 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	UBX3	Q12229	455 aa		4.7	□□□□□ -1.66
SUP35	YDR172W	CAR1	P00812	333 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-DR6	P0CX70	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-ER1	P0CX71	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-LR2	P0CX72	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-PL	P0CX73	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-JR1	P0CX74	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-LR3	P0CX75	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-ML2	P0CX76	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	YAK1	P14680	807 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	AMD1	P15274	810 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	SEC15	P22224	910 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	PDE1	P22434	369 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TFC3	P34111	1160 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	YKR051W	P36142	418 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	PDX3	P38075	228 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	MRP21	P38175	177 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	ECM13	P38195	257 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	HPM1	P40481	377 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	RSC8	P43609	557 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	RTT101	P47050	842 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	BFA1	P47113	574 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TAN1	P53072	289 aa	Predicted RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	MCM6	P53091	1017 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	PRO2	P54885	456 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	NUP100	Q02629	959 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	ECM38	Q05902	660 aa	Predicted RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	BCP1	Q06338	283 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
SUP35	YDR172W	MCA1	Q08601	432 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	SNX3	Q08826	162 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	PGC1	Q08959	321 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-GR1	Q12085	440 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	LPX1	Q12405	387 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	RRP36	Q12481	300 aa	Predicted RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	TY1A-OL	Q92392	440 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	SPE1	P08432	466 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	MIS1	P09440	975 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	CLN1	P20437	546 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	PTM1	P32857	523 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	TSA1	P34760	196 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	AST1	P35183	429 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	MAE1	P36013	669 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	MGE1	P38523	228 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	RIX1	P38883	763 aa	Predicted RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	RIO2	P40160	425 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	MMF1	P40185	145 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	YGR016W	P53209	190 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	COQ6	P53318	479 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	YDR131C	Q03899	556 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	RPN9	Q04062	393 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	HPT1	Q04178	221 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	YLR257W	Q06146	321 aa	Known RBP	4.69	□□□□□ -1.66
SUP35	YDR172W	SEC10	Q06245	871 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	YEH2	Q07950	538 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	YOR387C	Q08910	206 aa		4.69	□□□□□ -1.66
SUP35	YDR172W	HIP1	P06775	603 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms